Sequencing the species pan-genome

被引：46

作者：

Bentley, Stephen ^{[1
]}

机构：

[1] Sanger Inst, Cambridge CB10 1SA, England

来源：

NATURE REVIEWS MICROBIOLOGY | 2009年 / 7卷 / 04期

关键词：

D O I：

10.1038/nrmicro2123

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

This month's Genome Watch discusses the recent advances in sequencing technology that have allowed microbiologists to determine the genome sequences not just of individual species but also of entire genera and have allowed a view of the entire pan-bacterial genome.

引用

页码：258 / 259

页数：2

共 5 条

[1] Genetic analysis of the capsular biosynthetic locus from all 90 pneumococcal serotypes [J].

Bentley, Stephen D. ;

Aanensen, David M. ;

Mavroidi, Angeliki ;

Saunders, David ;

Rabbinowitsch, Ester ;

Collins, Matthew ;

Donohoe, Kathy ;

Harris, David ;

Murphy, Lee ;

Quail, Michael A. ;

Samuel, Gabby ;

Skovsted, Ian C. ;

Kaltoft, Margit Staum ;

Barrell, Bart ;

Reeves, Peter R. ;

Parkhill, Julian ;

Spratt, Brian G. .

PLOS GENETICS, 2006, 2 (03) :262-269

[2] Comparative genomic analyses of seventeen Streptococcus pneumoniae strains:: Insights into the pneumococcal supragenome [J].

Hiller, N. Luisa ;

Janto, Benjamin ;

Hogg, Justin S. ;

Boissy, Robert ;

Yu, Susan ;

Powell, Evan ;

Keefe, Randy ;

Ehrlich, Nathan E. ;

Shen, Kai ;

Hayes, Jay ;

Barbadora, Karen ;

Klimke, William ;

Dernovoy, Dmitry ;

Tatusova, Tatiana ;

Parkhill, Julian ;

Bentley, Stephen D. ;

Post, J. Christopher ;

Ehrlich, Garth D. ;

Hu, Fen Z. .

JOURNAL OF BACTERIOLOGY, 2007, 189 (22) :8186-8195

[3] Estimating the size of the bacterial pan-genome [J].

Lapierrel, Pascal ;

Gogarten, J. Peter .

TRENDS IN GENETICS, 2009, 25 (03) :107-110

[4] Evolution of the core and pan-genome of Strepococcus:: positive selection, recombination, and genome composition [J].

Lefebure, Tristan ;

Stanhope, Michael J. .

GENOME BIOLOGY, 2007, 8 (05)

[5] Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae:: Implications for the microbial "pan-genome" [J].

Tettelin, H ;

Masignani, V ;

Cieslewicz, MJ ;

Donati, C ;

Medini, D ;

Ward, NL ;

Angiuoli, SV ;

Crabtree, J ;

Jones, AL ;

Durkin, AS ;

DeBoy, RT ;

Davidsen, TM ;

Mora, M ;

Scarselli, M ;

Ros, IMY ;

Peterson, JD ;

Hauser, CR ;

Sundaram, JP ;

Nelson, WC ;

Madupu, R ;

Brinkac, LM ;

Dodson, RJ ;

Rosovitz, MJ ;

Sullivan, SA ;

Daugherty, SC ;

Haft, DH ;

Selengut, J ;

Gwinn, ML ;

Zhou, LW ;

Zafar, N ;

Khouri, H ;

Radune, D ;

Dimitrov, G ;

Watkins, K ;

O'Connor, KJB ;

Smith, S ;

Utterback, TR ;

White, O ;

Rubens, CE ;

Grandi, G ;

Madoff, LC ;

Kasper, DL ;

Telford, JL ;

Wessels, MR ;

Rappuoli, R ;

Fraser, CM .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (39) :13950-13955

← 1 →