Multicenter evaluation of the Bayer VERSANT™ HIV-1 RNA 3.0 assay:: analytical and clinical performance

被引:40
作者
Gleaves, CA
Welle, J
Campbell, M
Elbeik, T
Ng, V
Taylor, PE
Kuramoto, K
Aceituno, S
Lewalski, E
Joppa, B
Sawyer, L
Schaper, C
McNairn, D
Quinn, T
机构
[1] Providence Portland Med Ctr, Infect Dis Lab, Portland, OR 97213 USA
[2] Univ Calif San Francisco, Dept Lab Med, San Francisco, CA USA
[3] San Francisco Gen Hosp, Clin Labs, San Francisco, CA 94110 USA
[4] New York Blood Ctr, Lab Epidemiol, New York, NY 10021 USA
[5] Ctr Blood Res, Sacramento, CA USA
[6] Assay Dev Dept Nucle Acid Diagnost, Div Bayer Diagnost, Emeryville, CA USA
[7] Bayer Ref Testing Lab, Emeryville, CA USA
[8] Biostat Dept Nucle Acid Diagnost, Div Bayer Diagnost, Emeryville, CA USA
[9] Johns Hopkins Univ, Baltimore, MD USA
关键词
HIV-1 viral load; bDNA; PCR; performance evaluation;
D O I
10.1016/S1386-6532(02)00011-2
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Background: The use of quantitative HIV-1 RNA assays is part of the standard of care for the management of HIV-1-infected individuals. Objective: The Bayer VERSANT(TM) HIV-1 RNA 3.0 Assay (bDNA) was evaluated for reproducibility, linearity, limits of detection and quantitation, effects of potentially interfering substances and conditions, effects of plasma collection and handling conditions, clinical sensitivity and specificity, and biologic variability. Study design: Anti-HIV-1-positive specimens, patient specimens containing potentially interfering substances, and anti-HIV-negative specimens were collected from several HIV clinics, blood centers, or commercial companies across the United States. Specimen panels used to evaluate nonclinical performance of the assay were prepared at Bayer Diagnostics. Bayer Assay Development personnel performed two of the nonclinical studies-effect of freeze-thaw cycles using `spiked' HIV-1 RNA-positive samples and effect of other disease organisms. All other studies were conducted at seven external sites. In some of the studies performed, specimens were tested in parallel with the Roche AMPLICOR(R) HIV-1 MONITOR(TM) version 1.0 PCR test. Results /conclusions: The results of these studies showed that the Bayer Assay has excellent reproducibility, a broad linear range (75-500,000 HIV-1 RNA copies/ml), throughput of 168 patient results per two-plate run in a 22-h period, and few limitations for use. Because this test is designed for use only in individuals who are known to be HIV-1-positive, the clinical specificity of 97.6% is adequate for its intended use. These characteristics make it an attractive method for general laboratory use of monitoring HIV-1-infected patients. (C) 2002 Elsevier Science B.V. All rights reserved.
引用
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页码:205 / 216
页数:12
相关论文
共 12 条
[1]   Antiretroviral therapy in adults - Updated recommendations of the International AIDS Society-USA Panel [J].
Carpenter, CCJ ;
Cooper, DA ;
Fischl, MA ;
Gatell, JM ;
Gazzard, BG ;
Hammer, SM ;
Hirsch, MS ;
Jacobsen, DM ;
Katzenstein, DA ;
Montaner, JSG ;
Richman, DD ;
Saag, MS ;
Schechter, M ;
Schooley, RT ;
Vella, S ;
Yeni, PG ;
Volberding, PA .
JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION, 2000, 283 (03) :381-390
[2]   A branched DNA signal amplification assay for quantification of nucleic acid targets below 100 molecules/ml [J].
Collins, ML ;
Irvine, B ;
Tyner, D ;
Fine, E ;
Zayati, C ;
Chang, CA ;
Horn, T ;
Ahle, D ;
Detmer, J ;
Shen, LP ;
Kolberg, J ;
Bushnell, S ;
Urdea, MS ;
Ho, DD .
NUCLEIC ACIDS RESEARCH, 1997, 25 (15) :2979-2984
[3]  
*DEP HLTH HUM SERV, 2001, GUID US ANT AG HIV I
[4]  
Elbeik T, 2002, J ACQ IMMUN DEF SYND, V29, P330
[5]   Quantitative and cost comparison of ultrasensitive human immunodeficiency virus type 1 RNA viral load assays: Bayer bDNA Quantiplex versions 3.0 and 2.0 and Roche PCR Amplicor Monitor version 1.5 [J].
Elbeik, T ;
Charlebois, E ;
Nassos, P ;
Kahn, J ;
Hecht, FM ;
Yajko, D ;
Ng, V ;
Hadley, K .
JOURNAL OF CLINICAL MICROBIOLOGY, 2000, 38 (03) :1113-1120
[6]   Performance characteristics of the QUANTIPLEX HIV-1 RNA 3.0 assay for detection and quantitation of human immunodeficiency virus type 1 RNA in plasma [J].
Erice, A ;
Brambilla, D ;
Bremer, J ;
Jackson, JB ;
Kokka, R ;
Yen-Lieberman, B ;
Coombs, RW .
JOURNAL OF CLINICAL MICROBIOLOGY, 2000, 38 (08) :2837-2845
[7]   BIOLOGICAL AND BIOCHEMICAL-CHARACTERIZATION OF A CLONED LEU-3- CELL SURVIVING INFECTION WITH THE ACQUIRED-IMMUNE-DEFICIENCY-SYNDROME RETROVIRUS [J].
FOLKS, TM ;
POWELL, D ;
LIGHTFOOTE, M ;
KOENIG, S ;
FAUCI, AS ;
BENN, S ;
RABSON, A ;
DAUGHERTY, D ;
GENDELMAN, HE ;
HOGGAN, MD ;
VENKATESAN, S ;
MARTIN, MA .
JOURNAL OF EXPERIMENTAL MEDICINE, 1986, 164 (01) :280-290
[8]  
Hahn G.J., 1991, Statistical Intervals: A Guide for Practitioners and Researchers, VFirst, DOI 10.1002/
[9]   Comparison of the Quantiplex version 3.0 assay and a sensitized Amplicor Monitor assay for measurement of human immunodeficiency virus type 1 RNA levels in plasma samples [J].
Highbarger, HC ;
Alvord, WG ;
Jiang, MK ;
Shah, AS ;
Metcalf, JA ;
Lane, HC ;
Dewar, RL .
JOURNAL OF CLINICAL MICROBIOLOGY, 1999, 37 (11) :3612-3614
[10]   RAPID AND SIMPLE PCR ASSAY FOR QUANTITATION OF HUMAN-IMMUNODEFICIENCY-VIRUS TYPE-1 RNA IN PLASMA - APPLICATION TO ACUTE RETROVIRAL INFECTION [J].
MULDER, J ;
MCKINNEY, N ;
CHRISTOPHERSON, C ;
SNINSKY, J ;
GREENFIELD, L ;
KWOK, S .
JOURNAL OF CLINICAL MICROBIOLOGY, 1994, 32 (02) :292-300