The denaturation transition of DNA in mixed solvents

被引:47
作者
Hammouda, Boualem [1 ]
Worcestery, David
机构
[1] Natl Inst Stand & Technol, Ctr Neutron Res, Gaithersburg, MD 20899 USA
[2] Univ Calif Irvine, Cold Neutrons Biol & Technol Project, Dept Physiol & Biophys, Irvine, CA 92717 USA
[3] Univ Missouri, Div Biol, Columbia, MO 65211 USA
关键词
D O I
10.1529/biophysj.106.083691
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
The helix-to-coil denaturation transition in DNA has been investigated in mixed solvents at high concentration using ultraviolet light absorption spectroscopy and small-angle neutron scattering. Two solvents have been used: water and ethylene glycol. The "melting'' transition temperature was found to be 94 degrees C for 4% mass fraction DNA/d-water and 38 degrees C for 4% mass fraction DNA/d-ethylene glycol. The DNA melting transition temperature was found to vary linearly with the solvent fraction in the mixed solvents case. Deuterated solvents (d-water and d-ethylene glycol) were used to enhance the small-angle neutron scattering signal and 0.1M NaCl (or 0.0058 g/g mass fraction) salt concentration was added to screen charge interactions in all cases. DNA structural information was obtained by small-angle neutron scattering, including a correlation length characteristic of the inter-distance between the hydrogen-containing (desoxyribose sugar-amine base) groups. This correlation length was found to increase from 8.5 to 12.3 angstrom across the melting transition. Ethylene glycol and water mixed solvents were found to mix randomly in the solvation region in the helix phase, but nonideal solvent mixing was found in the melted coil phase. In the coil phase, solvent mixtures are more effective solvating agents than either of the individual solvents. Once melted, DNA coils behave like swollen water-soluble synthetic polymer chains.
引用
收藏
页码:2237 / 2242
页数:6
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