Phosphosite: A bioinformatics resource dedicated to physiological protein phosphorylation

被引:450
作者
Hornbeck, PV
Chabra, I
Kornhauser, JM
Skrzypek, E
Zhang, B
机构
[1] Cell Signaling Technol, Cummings Ctr, Beverly, MA 01915 USA
[2] ForScience Inc, Stony Brook, NY USA
关键词
database; kinase; phosphorylation; phosphorylation site; signal transduction;
D O I
10.1002/pmic.200300772
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
PhosphoSite(TM) is a curated, web-based bioinformatics resource dedicated to physiologic sites of protein phosphorylation in human and mouse. PhosphoSite is populated with information derived from published literature as well as high-throughput discovery programs. PhosphoSite provides information about the phosphorylated residue and its surrounding sequence, orthologous sites in other species, location of the site within known domains and motifs, and relevant literature references. Links are also provided to a number of external resources for protein sequences, structure, post-translational modifications and signaling pathways, as well as sources of phospho-specific antibodies and probes. As the amount of information in the underlying knowledgebase expands, users will be able to systematically search for the kinases, phosphatases, ligands, treatments, and receptors that have been shown to regulate the phosphorylation status of the sites, and pathways in which the phosphorylation sites function. As it develops into a comprehensive resource of known in vivo phosphorylation sites, we expect that PhosphoSite will be a valuable tool for researchers seeking to understand the role of intracellular signaling pathways in a wide variety of biological processes.
引用
收藏
页码:1551 / 1561
页数:11
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