Fast and accurate characterization of biological membranes by EPR spectral simulations of nitroxides

被引:69
作者
Strancar, J [1 ]
Sentjurc, M [1 ]
Schara, M [1 ]
机构
[1] J Stefan Inst, Ljubljana 1000, Slovenia
关键词
membranes; nitroxides; EPR; simulations; spin exchange;
D O I
10.1006/jmre.1999.1919
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
A method by which it is possible to characterize the membranes of biological samples on the basis of the EPR spectral lineshape simulation of membrane-dissolved nitroxide spin probes is described. The presented simulation procedure allows the determination of the heterogeneous structure of biological membranes and fluidity characteristics of individual membrane domains. The method can deal with isotropic and anisotropic orientations of nitroxides introduced into the biological samples described by restricted fast motion with a correlation time between 0.01 and 10 ns. The linewidths of the Lorentzian Lineshapes are calculated in a restricted fast-motion approximation. In the special case of samples with high concentrations of nitroxides or in the presence of paramagnetic ions, the lineshapes are calculated directly from the exchange-coupled Bloch equations. The parameters describing ordering, relaxation, polarity, and the portions of the individual spectral components are extracted by optimizing the simulated spectra to the experimental spectrum with either a Simplex or a Monte Carlo algorithm. To improve the algorithm's efficiency, a new way of characterizing the goodness of fits is introduced. The new criterion is based on the standard least-squares function, but with special weighting of the partial sums. Its benefits are confirmed with membrane spectral simulation. Two classes of examples-simulation and optimizations of synthetic spectra to evaluate the accuracy of the optimization algorithms and simulation and optimization of EPR spectra of nitroxides in liposome suspensions in the presence of a broadening agent and in human leukocytes are shown. (C) 2000 Academic Press.
引用
收藏
页码:254 / 265
页数:12
相关论文
共 30 条
[1]  
[Anonymous], 1989, NUMERICAL RECIPES AR
[2]   CELLULAR-VOLUME DETERMINATION OF FUNGUS CLAVICEPS-PURPUREA SCLEROTIC CELLS [J].
ANZUR, M ;
TOME, B ;
SENTJURC, M ;
SCHARA, M .
BIOTECHNOLOGY AND BIOENGINEERING, 1986, 28 (12) :1879-1883
[3]   Nonlinear-least-squares analysis of slow-motion EPR spectra in one and two dimensions using a modified Levenberg-Marquardt algorithm [J].
Budil, DE ;
Lee, S ;
Saxena, S ;
Freed, JH .
JOURNAL OF MAGNETIC RESONANCE SERIES A, 1996, 120 (02) :155-189
[4]  
CADER AA, 1995, INT J BIOCHEM CELL B, V27, P665
[5]  
FAYER PG, 1990, J MAGN RESON, V88, P11
[6]  
Griffith O. H., 1976, SPIN LABELING THEORY, P453
[7]   SHAPE OF HYDROPHOBIC BARRIER OF PHOSPHOLIPID BILAYERS (EVIDENCE FOR WATER PENETRATION IN BIOLOGICAL-MEMBRANES) [J].
GRIFFITH, OH ;
DEHLINGER, PJ ;
VAN, SP .
JOURNAL OF MEMBRANE BIOLOGY, 1974, 15 (02) :159-192
[8]  
HUBBELL WL, 1971, J AM CHEM SOC, V93, P314
[9]  
KORN GA, 1961, MATH HDB SCI ENG, P112
[10]   LIPID-PROTEIN INTERACTIONS AND HETEROGENEOUS LIPID DISTRIBUTION IN MEMBRANES [J].
MARSH, D .
MOLECULAR MEMBRANE BIOLOGY, 1995, 12 (01) :59-64