Exploring microRNA Biomarker for Amyotrophic Lateral Sclerosis

被引:39
作者
Taguchi, Y-h. [1 ]
Wang, Hsiuying [2 ]
机构
[1] Chuo Univ, Dept Phys, Bunkyo Ku, Tokyo 112855A, Japan
[2] Natl Chiao Tung Univ, Inst Stat, Hsinchu 30010, Taiwan
关键词
amyotrophic lateral sclerosis; biomarker; microRNA; UNSUPERVISED FEATURE-EXTRACTION; ENDOPLASMIC-RETICULUM STRESS; GENE-EXPRESSION; TDP-43; ALS; IDENTIFICATION; MUTATION; DISEASE; ACTIVATION; COMPONENT;
D O I
10.3390/ijms19051318
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
070307 [化学生物学]; 071010 [生物化学与分子生物学];
摘要
Amyotrophic lateral sclerosis (ALS) is among the severe neuro degenerative diseases that lack widely available effective treatments. As the disease progresses, patients lose the control of voluntary muscles. Although the neuronal degeneration is the cause of this disease, the failure mechanism is still unknown. In order to seek genetic mechanisms that initiate and progress ALS, the association of microRNA (miRNA) expression with this disease was considered. Serum miRNAs from healthy controls, sporadic ALS (sALS), familial ALS (fALS) and ALS mutation carriers were investigated. Principal component analysis (PCA)-based unsupervised feature extraction (FE) was applied to these serum miRNA profiles. As a result, we predict miRNAs that can discriminate patients from healthy controls with high accuracy. Thus, these miRNAs can be potential prognosis miRNA biomarkers for ALS.
引用
收藏
页数:10
相关论文
共 43 条
[1]
Ubiquitin pathways in neurodegenerative disease [J].
Atkin, Graham ;
Paulson, Henry .
FRONTIERS IN MOLECULAR NEUROSCIENCE, 2014, 7
[2]
Identification of miRNAs as Potential Biomarkers in Cerebrospinal Fluid from Amyotrophic Lateral Sclerosis Patients [J].
Benigni, Michele ;
Ricci, Claudia ;
Jones, Ashley R. ;
Giannini, Fabio ;
Al-Chalabi, Ammar ;
Battistini, Stefania .
NEUROMOLECULAR MEDICINE, 2016, 18 (04) :551-560
[3]
Nuclear factor TDP-43 can affect selected microRNA levels [J].
Buratti, Emanuele ;
De Conti, Laura ;
Stuani, Cristiana ;
Romano, Maurizio ;
Baralle, Marco ;
Baralle, Francisco .
FEBS JOURNAL, 2010, 277 (10) :2268-2281
[4]
Altered microRNA expression profile in amyotrophic lateral sclerosis: a role in the regulation of NFL mRNA levels [J].
Campos-Melo, Danae ;
Droppelmann, Cristian A. ;
He, Zhongping ;
Volkening, Kathryn ;
Strong, Michael J. .
MOLECULAR BRAIN, 2013, 6
[5]
Genetics of amyotrophic lateral sclerosis: an update [J].
Chen, Sheng ;
Sayana, Pavani ;
Zhang, Xiaojie ;
Le, Weidong .
MOLECULAR NEURODEGENERATION, 2013, 8
[6]
Aberration of miRNAs Expression in Leukocytes from Sporadic Amyotrophic Lateral Sclerosis [J].
Chen, YongPing ;
Wei, QianQian ;
Chen, XuePing ;
Li, ChunYu ;
Cao, Bei ;
Ou, RuWei ;
Hadano, Shinji ;
Shang, Hui-Fang .
FRONTIERS IN MOLECULAR NEUROSCIENCE, 2016, 9
[7]
Serum microRNAs in patients with genetic amyotrophic lateral sclerosis and pre-manifest mutation carriers [J].
Freischmidt, Axel ;
Mueller, Kathrin ;
Zondler, Lisa ;
Weydt, Patrick ;
Volk, Alexander E. ;
Bozic, Anze Losdorfer ;
Walter, Michael ;
Bonin, Michael ;
Mayer, Benjamin ;
von Arnim, Christine A. F. ;
Otto, Markus ;
Dieterich, Christoph ;
Holzmann, Karlheinz ;
Andersen, Peter M. ;
Ludolph, Albert C. ;
Danzer, Karin M. ;
Weishaupt, Jochen H. .
BRAIN, 2014, 137 :2938-2950
[8]
Systemic dysregulation of TDP-43 binding microRNAs in amyotrophic lateral sclerosis [J].
Freischmidt, Axel ;
Mueller, Kathrin ;
Ludolph, Albert C. ;
Weishaupt, Jochen H. .
ACTA NEUROPATHOLOGICA COMMUNICATIONS, 2013, 1
[9]
TDP-43 Is Not a Common Cause of Sporadic Amyotrophic Lateral Sclerosis [J].
Guerreiro, Rita J. ;
Schymick, Jennifer C. ;
Crews, Cynthia ;
Singleton, Andrew ;
Hardy, John ;
Traynor, Bryan J. .
PLOS ONE, 2008, 3 (06)
[10]
Role of ubiquitin-proteasome-mediated proteolysis in nervous system disease [J].
Hegde, Ashok N. ;
Upadhya, Sudarshan C. .
BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS, 2011, 1809 (02) :128-140