Partial NMR assignments for uniformly (13C, 15N)-enriched BPTI in the solid state

被引:220
作者
McDermott, A
Polenova, T
Bockmann, A
Zilm, KW
Paulsen, EK
Martin, RW
Montelione, GT
机构
[1] Columbia Univ, Dept Chem, New York, NY 10027 USA
[2] Yale Univ, Dept Chem, New Haven, CT 06511 USA
[3] Rutgers State Univ, Ctr Adv Biotechnol & Med, Piscataway, NJ 08854 USA
关键词
amino acid side chain; assignment protocol; bovine pancreatic trypsin inhibitor; solid state NMR; uniform labeling;
D O I
10.1023/A:1008391625633
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We demonstrate that high-resolution multidimensional solid state NMR methods can be used to correlate many backbone and side chain chemical shifts for hydrated micro-crystalline U-C-13,N-15 Basic Pancreatic Trypsin Inhibitor (BPTI), using a field strength of 800 MHz for protons, magic angle sample spinning rates of 20 kHz and proton decoupling field strengths of 140 kHz. Results from two homonuclear transfer methods, radio frequency driven dipolar recoupling and spin diffusion, were compared. Typical C-13 peak line widths are 0.5 ppm, resulting in C alpha-C beta and C alpha-CO regions that exhibit many resolved peaks. Two-dimensional carbon-carbon correlation spectra of BPTI have sufficient resolution to identify and correlate many of the spin systems associated with the amino acids. As a result, we have been able to assign a large number of the spin systems in this protein. The agreement between shifts measured in the solid state and those in solution is typically very good, although some shifts near the ion binding sites differ by at least 1.5 ppm. These studies were conducted with approximately 0.2 to 0.4 mu mol of enriched material; the sensitivity of this method is apparently adequate for other biological systems as well.
引用
收藏
页码:209 / 219
页数:11
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