A detailed phenotypic and genotypic description of Pseudomonas strain OX1

被引:18
作者
Cladera, Aina Maria
Sepulveda-Torres, Lycely del C.
Valens-Vadell, Maria
Meyer, Jean-Marie
Lalucat, Jorge
Garcia-Valdes, Elena
机构
[1] Univ Illes Balears, Dept Biol, Palma de Mallorca 07122, Spain
[2] Univ Illes Balears, CSIC, Inst Mediterrani Estudis Avancats, Palma de Mallorca 07122, Spain
[3] Univ Metropolitana, Dept Sci & Technol, San Juan, PR USA
[4] Univ Strasbourg 1, UMR CNRS 7156, Lab Microbiol & Genet, F-67083 Strasbourg, France
关键词
Pseudomonas OX1; multilocus sequence analysis (MLSA); taxonomy;
D O I
10.1016/j.syapm.2005.11.007
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Strain OX1 exhibits important physiological, ecological, and blotechnological properties in the degradation of chemical pollutants. It was previously classified as a member of Pseudomonas stutzeri based on its phenotypic characteristics. The present taxonomic study describes phenotypic and genomic properties of strain OX1 and illustrates the value both of multigenic sequence analysis and siderotyping methods to justify its species circumscription within the genus Pseudomonas. We have concluded that strain OX1 is a member of the Pseudomonas corrugata group, distantly related to P. stutzeri, and should be considered representative of a new species. However, phenotypic differentiation between species in this group remains difficult, and species proposals based on only a single strain must be cautious. We, therefore, prefer not to propose a new species until more strains with the same genomic and phenotypic properties as strain OX1 have been isolated. (c) 2005 Elsevier GmbH. All rights reserved.
引用
收藏
页码:422 / 430
页数:9
相关论文
共 33 条
[1]   Pseudomonas brassicacearum sp nov and Pseudomonas thivervalensis sp nov., two root-associated bacteria isolated from Brassica napus and Arabidopsis thaliana [J].
Achouak, W ;
Sutra, L ;
Heulin, T ;
Meyer, JM ;
Fromin, N ;
Degraeve, S ;
Christen, R ;
Gardan, L .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2000, 50 :9-18
[2]   Pseudomonas frederiksbergensis sp nov., isolated from soil at a coal gasification site [J].
Andersen, SM ;
Johnsen, K ;
Sorensen, J ;
Nielsen, P ;
Jacobsen, CS .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2000, 50 :1957-1964
[3]   Phylogenetic affiliation of the pseudomonads based on 16S rRNA sequence [J].
Anzai, Y ;
Kim, H ;
Park, JY ;
Wakabayashi, H ;
Oyaizu, H .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2000, 50 :1563-1589
[4]   ISOLATION OF A PSEUDOMONAS-STUTZERI STRAIN THAT DEGRADES ORTHO-XYLENE [J].
BAGGI, G ;
BARBIERI, P ;
GALLI, E ;
TOLLARI, S .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1987, 53 (09) :2129-2132
[5]  
BARBIERI P, 1989, FEMS MICROBIOL ECOL, V62, P375, DOI 10.1111/j.1574-6968.1989.tb03393.x
[6]   Evolution of catabolic pathways and metabolic versatility in Pseudomonas stutzeri OX1 [J].
Barbieri, P ;
Arenghi, FLG ;
Bertoni, G ;
Bolognese, F ;
Galli, E .
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2001, 79 (02) :135-140
[7]   A multidomain xylanase from a Bacillus sp with a region homologous to thermostabilizing domains of thermophilic enzymes [J].
Blanco, A ;
Díaz, P ;
Zueco, J ;
Parascandola, P ;
Pastor, FIJ .
MICROBIOLOGY-SGM, 1999, 145 :2163-2170
[8]  
Catara V, 2002, INT J SYST EVOL MICR, V52, P1749, DOI [10.1099/ijs.0.02174-0, 10.1099/00207713-52-5-1749]
[9]   Comparative genetic diversity of Pseudomonas stutzeri genomovars, clonal structure, and phylogeny of the species [J].
Cladera, AM ;
Bennasar, A ;
Barceló, M ;
Lalucat, J ;
García-Valdés, E .
JOURNAL OF BACTERIOLOGY, 2004, 186 (16) :5239-5248
[10]  
COWAN ST, 1974, IDENTIFICATION MED B