A comparative study of the microbiology of soils managed under organic and conventional regimes

Previous studies of the microbial status of soils managed under 'organic' and 'conventional' regimes have produced conflicting evidence of whether there are distinct differences in the size, composition and activity of the soil microbial biomass which may be attributed to management practice. In the present study, we have compared the microbiology of organically- and conventionally-managed soils at (primarily) two farms in England, over a two year period. Differences in microbial communities in soils under different management practice were subtle rather than dramatic. Many of the parameters measured, including total C and microbial biomass C, often showed no consistently significant differences in soils under different management. In soils from one farm, concentrations of ATP in Ringers solution soil extracts were mostly found to be significantly greater in organically-managed than in comparable conventionally-managed soils. While indirect (plate) counts showed that there were similar numbers of cultivable microorganisms present in these soils, total counts of bacteria (via DAPI-staining) were found to parallel the trends found for readily-extractable ATP. Numbers of metabolically-active bacteria, determined by FISH analysis using a EUB338 probe to detect ribosome-rich cells, indicated that the percentage of metabolically-active bacteria present was not determined by management practice. Total and active fungi were also found to be more abundant in organically-managed soils. It was concluded that changes in soil microbiology may occur as a consequence of switching to organic land management, but these may not be detectable by methods used frequently to assess soil biomass. In particular, increased numbers of viable but non-culturable bacteria and fungi in organically-managed soils points to a greater physiological diversity of microorganisms in such situations.