Where did the BLOSUM62 alignment score matrix come from?

被引:202
作者
Eddy, SR
机构
[1] Washington Univ, Sch Med, Howard Hughes Med Inst, St Louis, MO 63108 USA
[2] Washington Univ, Sch Med, Dept Genet, St Louis, MO 63108 USA
关键词
D O I
10.1038/nbt0804-1035
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Many sequence alignment programs use the BLOSUM62 score matrix to score pairs of aligned residues. Where did BLOSUM62 come from?
引用
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页码:1035 / 1036
页数:2
相关论文
共 3 条
[1]   AMINO-ACID SUBSTITUTION MATRICES FROM AN INFORMATION THEORETIC PERSPECTIVE [J].
ALTSCHUL, SF .
JOURNAL OF MOLECULAR BIOLOGY, 1991, 219 (03) :555-565
[2]   AMINO-ACID SUBSTITUTION MATRICES FROM PROTEIN BLOCKS [J].
HENIKOFF, S ;
HENIKOFF, JG .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1992, 89 (22) :10915-10919
[3]   METHODS FOR ASSESSING THE STATISTICAL SIGNIFICANCE OF MOLECULAR SEQUENCE FEATURES BY USING GENERAL SCORING SCHEMES [J].
KARLIN, S ;
ALTSCHUL, SF .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1990, 87 (06) :2264-2268