Using genetic markers to estimate the pollen dispersal curve

被引:247
作者
Austerlitz, F [1 ]
Dick, CW
Dutech, C
Klein, EK
Oddou-Muratorio, S
Smouse, PE
Sork, VL
机构
[1] Univ Paris 11, UMR CNRS 8079, Lab Ecol Systemat & Evolut, F-91405 Orsay, France
[2] Smithsonian Trop Res Inst, Unit 0948, APO, AA 34002 USA
[3] Inst Nacl de Pesquisas da Amazonia, Biol Dynam Forest Fragments Project, BR-69011970 Manaus, Amazonas, Brazil
[4] Univ Calif Los Angeles, Dept Organism Biol Ecol & Evolut, Los Angeles, CA 90095 USA
[5] INRA Bordeaux, UMR BioGEco, F-33883 Villenave Dornon, France
[6] INRA INAPG ENGREF, UMR Biometrie & Intelligence Artificielle 518, F-75231 Paris 05, France
[7] Off Natl Forets, Conservatoire Genet Arbres Forestiers, F-45160 Olivet, France
[8] Rutgers State Univ, Dept Ecol Evolut & Nat Resources, New Brunswick, NJ 08903 USA
关键词
gene flow; long-distance dispersal; microsatellites; plants; trees; TWOGENER;
D O I
10.1111/j.1365-294X.2004.02100.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Pollen dispersal is a critical process that shapes genetic diversity in natural populations of plants. Estimating the pollen dispersal curve can provide insight into the evolutionary dynamics of populations and is essential background for making predictions about changes induced by perturbations. Specifically, we would like to know whether the dispersal curve is exponential, thin-tailed (decreasing faster than exponential), or fat-tailed (decreasing slower than the exponential). In the latter case, rare events of long-distance dispersal will be much more likely. Here we generalize the previously developed TWOGENER method, assuming that the pollen dispersal curve belongs to particular one- or two-parameter families of dispersal curves and estimating simultaneously the parameters of the dispersal curve and the effective density of reproducing individuals in the population. We tested this method on simulated data, using an exponential power distribution, under thin-tailed, exponential and fat-tailed conditions. We find that even if our estimates show some bias and large mean squared error (MSE), we are able to estimate correctly the general trend of the curve - thin-tailed or fat-tailed - and the effective density. Moreover, the mean distance of dispersal can be correctly estimated with low bias and MSE, even if another family of dispersal curve is used for the estimation. Finally, we consider three case studies based on forest tree species. We find that dispersal is fat-tailed in all cases, and that the effective density estimated by our model is below the measured density in two of the cases. This latter result may reflect the difficulty of estimating two parameters, or it may be a biological consequence of variance in reproductive success of males in the population. Both the simulated and empirical findings demonstrate the strong potential of TWOGENER for evaluating the shape of the dispersal curve and the effective density of the population (d(e)).
引用
收藏
页码:937 / 954
页数:18
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