A direct-dynamics study of proton transfer through water bridges in guanine and 7-azaindole

被引:78
作者
Smedarchina, Z
Siebrand, W
Fernández-Ramos, A
Gorb, L
Leszczynski, J
机构
[1] Natl Res Council Canada, Steacie Inst Mol Sci, Ottawa, ON K1A 0R6, Canada
[2] Jackson State Univ, Dept Chem, Ctr Mol Struct & Interact, Jackson, MS 39217 USA
关键词
D O I
10.1063/1.480549
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
To evaluate the efficiency of bridges of water molecules as proton conduits, multidimensional ab initio proton transfer rate constants are reported for complexes of guanine and 7-azaindole with one and two water molecules. These water molecules form hydrogen-bonded bridges between functional groups involved in tautomerization via proton transfer and catalyze this transfer. Structures and energies of the relevant stationary configurations are optimized at the second-order Moller-Plesset level and vibrational force fields are evaluated at the Hartree-Fock level. The proton transfer rate constants, calculated with the instanton method, show the effect of the structure and strength of the hydrogen bonds, reflected in couplings between the tunneling mode and the other vibrations of the complexes. The results indicate that strongly hydrogen-bonded, strain-free water bridges can serve as very efficient proton conduits. (C) 2000 American Institute of Physics. [S0021-9606(00)52202-8].
引用
收藏
页码:566 / 573
页数:8
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