Density functional theory investigation of the active site of Fe-hydrogenases.: Systematic study of the effects of redox state and ligands hardness on structural and electronic properties of complexes related to the [2Fe]H subcluster

被引:55
作者
Bruschi, M
Fantucci, P
De Gioia, L
机构
[1] Univ Milan, Dept Environm Sci, I-20126 Milan, Italy
[2] Univ Milan, Dept Biosci & Biotechnol, I-20126 Milan, Italy
关键词
D O I
10.1021/ic035326y
中图分类号
O61 [无机化学];
学科分类号
070301 ; 081704 ;
摘要
Density functional theory has been used to investigate complexes related to the [2Fe](H) subduster of [Fe]-hydrogenases. In particular, the effects on structural and electronic properties of redox state and ligands with different sigma-donor T-acceptor character, which replace the cysteine residue coordinated to the [2Fe](H) subduster in the enzyme, have been investigated. Results show that the structural and electronic properties of fully reduced (FeFeI)-Fe-I complexes are strongly affected by the nature of the ligand L, and in particular, a progressive rotation of the Fe-d(CO)(2)(CN) group, with a CO ligand moving from a terminal to a semibridged position, is observed going from the softest to the hardest ligand. For the partially oxidized (FeFeII)-Fe-I complexes, two isomers of similar stability, characterized either by a CO ligand in a terminal or bridged position, have been observed. The switching between the two forms is associated with a spin and charge transfer between the two iron atoms, a feature that could be relevant in the catalytic mechanism of dihydrogen activation. The structure of the fully oxidized (FeFeII)-Fe-II models is extremely dependent on the nature of the L ligand; one CO group coordinated to Fed switches from terminal to bridging position going from complexes characterized by neutral to anionic L ligands.
引用
收藏
页码:3733 / 3741
页数:9
相关论文
共 43 条
[1]   DENSITY-FUNCTIONAL THERMOCHEMISTRY .3. THE ROLE OF EXACT EXCHANGE [J].
BECKE, AD .
JOURNAL OF CHEMICAL PHYSICS, 1993, 98 (07) :5648-5652
[2]   DENSITY-FUNCTIONAL THERMOCHEMISTRY .1. THE EFFECT OF THE EXCHANGE-ONLY GRADIENT CORRECTION [J].
BECKE, AD .
JOURNAL OF CHEMICAL PHYSICS, 1992, 96 (03) :2155-2160
[3]   DENSITY-FUNCTIONAL EXCHANGE-ENERGY APPROXIMATION WITH CORRECT ASYMPTOTIC-BEHAVIOR [J].
BECKE, AD .
PHYSICAL REVIEW A, 1988, 38 (06) :3098-3100
[4]   QUANTUM-MECHANICAL STUDIES ON THE ORIGIN OF BARRIERS TO INTERNAL-ROTATION ABOUT SINGLE BONDS [J].
BRUNCK, TK ;
WEINHOLD, F .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1979, 101 (07) :1700-1709
[5]   DFT investigation of structural, electronic, and catalytic properties of diiron complexes related to the [2Fe]H subcluster of Fe-only hydrogenases [J].
Bruschi, M ;
Fantucci, P ;
De Gioia, L .
INORGANIC CHEMISTRY, 2002, 41 (06) :1421-1429
[6]   Density functional theory investigation of the active site of [Fe]-hydrogenases:: Effects of redox state and ligand characteristics on structural, electronic, and reactivity properties of complexes related to the [2Fe]H subcluster [J].
Bruschi, M ;
Fantucci, P ;
De Gioia, L .
INORGANIC CHEMISTRY, 2003, 42 (15) :4773-4781
[7]   Tailoring transition metal complexes for non linear optics applications -: A theoretical investigation of the electronic structure of M(CO)xClyL complexes (M = Cr, W, Re, Ru, Os, Rh, Ir; L = Pyz, PyzBF3, BPE, BPEBF3) [J].
Bruschi, M ;
Fantucci, P ;
Pizzotti, M ;
Rovizzi, C .
JOURNAL OF MOLECULAR CATALYSIS A-CHEMICAL, 2003, 204 :793-803
[8]   Modeling the active sites in metalloenzymes. 3. Density functional calculations on models for [Fe]-hydrogenase: Structures and vibrational frequencies of the observed redox forms and the reaction mechanism at the diiron active center [J].
Cao, ZX ;
Hall, MB .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2001, 123 (16) :3734-3742
[9]   Addition of polarization and diffuse functions to the LANL2DZ basis set for p-block elements [J].
Check, CE ;
Faust, TO ;
Bailey, JM ;
Wright, BJ ;
Gilbert, TM ;
Sunderlin, LS .
JOURNAL OF PHYSICAL CHEMISTRY A, 2001, 105 (34) :8111-8116
[10]   Infrared studies of the CO-inhibited form of the Fe-only hydrogenase from Clostridium pasteurianum I:: Examination of its light sensitivity at cryogenic temperatures [J].
Chen, ZJ ;
Lemon, BJ ;
Huang, S ;
Swartz, DJ ;
Peters, JW ;
Bagley, KA .
BIOCHEMISTRY, 2002, 41 (06) :2036-2043