Rapid changes in the rhizosphere bacterial community structure during re-colonization of sterilized soil

被引:58
作者
Marschner, P [1 ]
Rumberger, A [1 ]
机构
[1] Univ Hamburg, Inst Appl Bot, D-20355 Hamburg, Germany
关键词
succession; bacterial community structure; denaturing gradient gel electrophoresis; diversity; rhizosphere;
D O I
10.1007/s00374-004-0736-4
中图分类号
S15 [土壤学];
学科分类号
0903 ; 090301 ;
摘要
Diversity has been shown to be pivotal in ecosystem stability and resilience. It is therefore important to increase our knowledge about the development of diversity. The aim of this study was to investigate the temporal dynamics of the bacterial community structure in the rhizosphere of wheat plants growing in a soil in which the initial conditions for bacterial re-colonization were modified by mixing different amounts of sterilized with native soil at ratios of 19:1, 9:1, 4:1 and 1:1. Additional treatments comprised sterilized soil or native soil. Plant dry weight at day 20 decreased with increasing percentage of native soil in the mix. The bacterial community structure in the rhizosphere was assessed by polymerase chain reaction-denaturing gradient gel electrophoresis (DGGE) at days 3, 14 and 20 after planting. The bacterial community in the sterilized soil had a lower diversity and evenness than the native soil. Both diversity and evenness increased with time in the sterilized soil. Community structure in the different mixes changed over time and the changes were mix-specific. Principal component analyses of the DGGE banding patterns showed clear differences between the treatments particularly at day 3 and day 14 and revealed changes in community structure within a few days in a given treatment. The results of the present study show that bacterial communities rapidly re-colonize sterilized soil. During re-colonization, the community structure changes rapidly with a general trend towards higher diversity and evenness. The changes in community structure over time are also affected by the amount of sterile substrate to be re-colonized.
引用
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页码:1 / 6
页数:6
相关论文
共 29 条
[1]   Competitive PCR-DGGE analysis of bacterial mixtures an internal standard and an appraisal of template enumeration accuracy [J].
Brüggemann, J ;
Stephen, JR ;
Chang, YJ ;
Macnaughton, SJ ;
Kowalchuk, GA ;
Kline, E ;
White, DC .
JOURNAL OF MICROBIOLOGICAL METHODS, 2000, 40 (02) :111-123
[2]   Bacterial primary colonization and early succession on surfaces in marine waters as determined by amplified rRNA gene restriction analysis and sequence analysis of 16S rRNA genes [J].
Dang, HY ;
Lovell, CR .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2000, 66 (02) :467-475
[3]   Response of a soil bacterial community to grassland succession as monitored by 16S rRNA levels of the predominant ribotypes [J].
Felske, A ;
Wolterink, A ;
Van Lis, R ;
De Vos, WM ;
Akkermans, ADL .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2000, 66 (09) :3998-4003
[4]   CONCEPT OF R-SELECTION AND K-SELECTION - EVIDENCE FROM WILD FLOWERS AND SOME THEORETICAL CONSIDERATIONS [J].
GADGIL, M ;
SOLBRIG, OT .
AMERICAN NATURALIST, 1972, 106 (947) :14-+
[5]  
Garland JL, 2001, MICROBIAL ECOL, V42, P150
[6]   Assessment of bacterial community structure in soil by polymerase chain reaction and denaturing gradient gel electrophoresis. [J].
Gelsomino, A ;
Keijzer-Wolters, AC ;
Cacco, G ;
van Elsas, JD .
JOURNAL OF MICROBIOLOGICAL METHODS, 1999, 38 (1-2) :1-15
[7]   Ecosystem response of pasture soil communities to fumigation-induced microbial diversity reductions:: an examination of the biodiversity-ecosystem function relationship [J].
Griffiths, BS ;
Ritz, K ;
Bardgett, RD ;
Cook, R ;
Christensen, S ;
Ekelund, F ;
Sorensen, SJ ;
Bååth, E ;
Bloem, J ;
de Ruiter, PC ;
Dolfing, J ;
Nicolardot, B .
OIKOS, 2000, 90 (02) :279-294
[8]   Analysis of actinomycete communities by specific amplification of genes encoding 16S rRNA and gel-electrophoretic separation in denaturing gradients [J].
Heuer, H ;
Krsek, M ;
Baker, P ;
Smalla, K ;
Wellington, EMH .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1997, 63 (08) :3233-3241
[9]   Microbial dynamics associated with multiphasic decomposition of C-14-labeled cellulose in soil [J].
Hu, S ;
vanBruggen, AHC .
MICROBIAL ECOLOGY, 1997, 33 (02) :134-143
[10]  
Jackson CR, 1998, APPL ENVIRON MICROB, V64, P5046