The effect of ring currents on carbon chemical shifts in cytochromes

被引:17
作者
Blanchard, L [1 ]
Hunter, CN [1 ]
Williamson, MP [1 ]
机构
[1] UNIV SHEFFIELD,KREBS INST,DEPT MOL BIOL & BIOTECHNOL,SHEFFIELD S10 2TN,S YORKSHIRE,ENGLAND
关键词
carbon chemical shifts; cytochrome c; secondary structure; heme ring current effect;
D O I
10.1023/A:1018394410613
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Calculations suggest that some carbon chemical shifts in proteins should have large ring current shifts (>1 ppm). We present C-13, N-15 and H-1 assignments for cytochrome c(2) from Rhodospirillum rubrum, compare these with shifts for other cytochromes c, and show that the calculated ring current shifts are similar to experimentally observed shifts, but that there remain substantial conformation-dependent shifts of side-chain carbons. Ring current shifts as large as 6 ppm are observed. We show that the ring current effects do not seriously affect the Chemical Shift Index method for delineating secondary structure, but may have an impact on more precise methods for generating structural constraints.
引用
收藏
页码:389 / 395
页数:7
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