Modularity optimization in community detection of complex networks

被引:85
作者
Zhang, X. S. [1 ]
Wang, R. S. [2 ]
Wang, Y. [1 ]
Wang, J. [1 ]
Qiu, Y. [1 ]
Wang, L. [1 ]
Chen, L. [3 ]
机构
[1] Chinese Acad Sci, Acad Math & Syst Sci, Beijing 100190, Peoples R China
[2] Penn State Univ, Dept Phys, University Pk, PA 16802 USA
[3] Osaka Sangyo Univ, Dept Elect Engn & Elect, Osaka 5748530, Japan
关键词
D O I
10.1209/0295-5075/87/38002
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
Detecting community structure in complex networks is a fundamental but challenging topic in network science. Modularity measures, such as widely used modularity function Q and recently suggested modularity density D, play critical roles as quality indices in partitioning a network into communities. In this letter, we reveal the complex behaviors of modularity optimization under different community definitions by an analytic study. Surprisingly, we find that in addition to the resolution limit of Q revealed in a recent study, both Q and D suffer from a more serious limitation, i.e. some derived communities do not satisfy the weak community definition or even the most weak community definition. Especially, the latter case, called as misidentification, implies that these communities may have sparser connection within them than between them, which violates the basic intuitive sense for a subgraph to be a community. Using a discrete convex optimization framework, we investigate the underlying causes for these limitations and provide insights on choices of the modularity measures in applications. Numerical experiments on artificial and real-life networks confirm the theoretical analysis. Copyright (C) EPLA, 2009
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页数:6
相关论文
共 22 条
[1]   Statistical mechanics of complex networks [J].
Albert, R ;
Barabási, AL .
REVIEWS OF MODERN PHYSICS, 2002, 74 (01) :47-97
[2]  
[Anonymous], 1998, Connections
[3]  
Bazaraa MS., 2013, Nonlinear programming: theory and algorithms
[4]   Resolution limit in community detection [J].
Fortunato, Santo ;
Barthelemy, Marc .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2007, 104 (01) :36-41
[5]   Community structure in social and biological networks [J].
Girvan, M ;
Newman, MEJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (12) :7821-7826
[6]   Community structure in jazz [J].
Gleiser, PM ;
Danon, L .
ADVANCES IN COMPLEX SYSTEMS, 2003, 6 (04) :565-573
[7]   Functional cartography of complex metabolic networks [J].
Guimerà, R ;
Amaral, LAN .
NATURE, 2005, 433 (7028) :895-900
[8]   Self-similar community structure in a network of human interactions -: art. no. 065103 [J].
Guimerà, R ;
Danon, L ;
Díaz-Guilera, A ;
Giralt, F ;
Arenas, A .
PHYSICAL REVIEW E, 2003, 68 (06)
[9]   Transcriptional regulatory code of a eukaryotic genome [J].
Harbison, CT ;
Gordon, DB ;
Lee, TI ;
Rinaldi, NJ ;
Macisaac, KD ;
Danford, TW ;
Hannett, NM ;
Tagne, JB ;
Reynolds, DB ;
Yoo, J ;
Jennings, EG ;
Zeitlinger, J ;
Pokholok, DK ;
Kellis, M ;
Rolfe, PA ;
Takusagawa, KT ;
Lander, ES ;
Gifford, DK ;
Fraenkel, E ;
Young, RA .
NATURE, 2004, 431 (7004) :99-104
[10]   Comparative definition of community and corresponding identifying algorithm [J].
Hu, Yanqing ;
Chen, Hongbin ;
Zhang, Peng ;
Li, Menghui ;
Di, Zengru ;
Fan, Ying .
PHYSICAL REVIEW E, 2008, 78 (02)