Biomolecular NMR: a chaperone to drug discovery

被引:25
作者
Betz, Marco [1 ]
Saxena, Krishna [1 ]
Schwalbe, Harald [1 ]
机构
[1] Goethe Univ Frankfurt, Inst Organ Chem & Chem Biol, Ctr Biomol Magnet Resonance, D-60439 Frankfurt, Germany
关键词
D O I
10.1016/j.cbpa.2006.04.006
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Biomolecular NMR now contributes routinely to every step in the development of new chemical entities ahead of clinical trials. The versatility of NMR - from detection of ligand binding over a wide range of affinities and a wide range of drug targets with its wealth of molecular information, to metabolomic profiling, both ex vivo and in vivo - has paved the way for broadly distributed applications in academia and the pharmaceutical industry. Proteomics and initial target selection both benefit from NMR: screenings by NMR identify lead compounds capable of inhibiting protein-protein interactions, still one of the most difficult development tasks in drug discovery. NMR hardware improvements have given access to the microgram domain of phytochemistry, which should lead to the discovery of novel bioactive natural compounds. Steering medicinal chemists through the lead optimisation process by providing detailed information about protein-ligand interactions has led to impressive success in the development of novel drugs. The study of biofluid composition metabonomics - provides information about pharmacokinetics and helps toxicological safety assessment in animal model systems. In vivo, magnetic resonance spectroscopy interrogates metabolite distributions in living cells and tissues with increasing precision, which significantly impacts the development of anticancer or neurological disorder therapeutics. An overview of different steps in recent drug discovery is presented to illuminate the links with the most recent advances in NMR methodology.
引用
收藏
页码:219 / 225
页数:7
相关论文
共 49 条
[1]   SAR by ILOEs: An NMIR-based approach to reverse chemical genetics [J].
Becattini, B ;
Pellecchia, M .
CHEMISTRY-A EUROPEAN JOURNAL, 2006, 12 (10) :2658-2662
[2]   Combining in silico tools and NMR data to validate protein-ligand structural models: Application to matrix metalloproteinases [J].
Bertini, I ;
Fragai, M ;
Giachetti, A ;
Luchinat, C ;
Maletta, M ;
Parigi, G ;
Yeo, KJ .
JOURNAL OF MEDICINAL CHEMISTRY, 2005, 48 (24) :7544-7559
[3]   NMR-based metabonomic approaches for evaluating physiological influences on biofluid composition [J].
Bollard, ME ;
Stanley, EG ;
Lindon, JC ;
Nicholson, JK ;
Holmes, E .
NMR IN BIOMEDICINE, 2005, 18 (03) :143-162
[4]   NMR analysis of protein interactions [J].
Bonvin, AMJJ ;
Boelens, R ;
Kaptein, R .
CURRENT OPINION IN CHEMICAL BIOLOGY, 2005, 9 (05) :501-508
[5]   Ligand-target interactions: What can we learn from NMR? [J].
Carlomagno, T .
ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE, 2005, 34 :245-266
[6]   The dimer interface of the SARS coronavirus nucleocapsid protein adapts a porcine respiratory and reproductive syndrome virus-like structure [J].
Chang, CK ;
Sue, SC ;
Yu, TH ;
Hsieh, CM ;
Tsai, CK ;
Chiang, YC ;
Lee, SJ ;
Hsiao, HH ;
Wu, WJ ;
Chang, CF ;
Huang, TH .
FEBS LETTERS, 2005, 579 (25) :5663-5668
[7]   Monitoring the effects of antagonists on protein-protein interactions with NMR spectroscopy [J].
D'Silva, L ;
Ozdowy, P ;
Krajewski, M ;
Rothweiler, U ;
Singh, M ;
Holak, TA .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2005, 127 (38) :13220-13226
[8]   Structural basis for SUMO-E2 interaction revealed by a complex model using docking approach in combination with NMR data [J].
Ding, HS ;
Yang, YD ;
Zhang, JH ;
Wu, JH ;
Liu, HY ;
Shi, YY .
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2005, 61 (04) :1050-1058
[9]   Targeting protein-protein interactions for cancer therapy [J].
Fry, DC ;
Vassilev, LT .
JOURNAL OF MOLECULAR MEDICINE-JMM, 2005, 83 (12) :955-963
[10]   In vivo magnetic resonance spectroscopy in cancer [J].
Gillies, RJ ;
Morse, DL .
ANNUAL REVIEW OF BIOMEDICAL ENGINEERING, 2005, 7 :287-326