Effect of the bulky side chain on the backbone structure of the amino acid derivative valinamide

被引:27
作者
Lavrich, RJ [1 ]
Torok, CR [1 ]
Tubergen, MJ [1 ]
机构
[1] Kent State Univ, Dept Chem, Kent, OH 44242 USA
关键词
D O I
10.1021/jp020663y
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Rotational spectra have been recorded for five isotopic species of valinamide, the amide derivative of the amino acid valine. The rotational constants for the normal species are A = 3019.242(1) MHz, B = 1473.0587(7) MHz and C = 1252.5350(8) MHz. Ab initio calculations at the MP2/6-31G** level identified six conformational minima with three different orientations of the isopropyl side chain and two different intramolecular hydrogen bonding interactions. None of the theoretical structures reproduces the fifteen experimental moments of inertia derived from the rotational constants. Least-squares fits of the theoretical structure with chi(1) = 300degrees and an amide-to-amine intramolecular hydrogen bond find that the amino amide backbone torsional angle Psi increases from -9.3degrees to +9.7(30)degrees. The nitrogen atomic coordinates of the least-squares-fit structure were found to be in agreement with the coordinates calculated using Kraitchman's equations for single isotopic substitution, but the nitrogen coordinates of the theoretical structures were significantly different from the Kraitchman coordinates.
引用
收藏
页码:8013 / 8018
页数:6
相关论文
共 35 条
[1]   FABRY-PEROT CAVITY PULSED FOURIER-TRANSFORM MICROWAVE SPECTROMETER WITH A PULSED NOZZLE PARTICLE SOURCE [J].
BALLE, TJ ;
FLYGARE, WH .
REVIEW OF SCIENTIFIC INSTRUMENTS, 1981, 52 (01) :33-45
[2]   MICROWAVE-SPECTRUM AND CONFORMATION OF GLYCINE [J].
BROWN, RD ;
GODFREY, PD ;
STOREY, JWV ;
BASSEZ, MP .
JOURNAL OF THE CHEMICAL SOCIETY-CHEMICAL COMMUNICATIONS, 1978, (13) :547-548
[3]  
Cl L., 2023, GAUSSIAN94, V14, DOI [10.3389/fimmu, DOI 10.3389/FIMMU]
[4]  
Csaszar A., COMMUNICATION
[5]   Rotational spectra of seven conformational isomers of 1-hexene [J].
Fraser, GT ;
Suenram, RD ;
Lugez, CL .
JOURNAL OF PHYSICAL CHEMISTRY A, 2000, 104 (06) :1141-1146
[6]   SHAPE OF GLYCINE [J].
GODFREY, PD ;
BROWN, RD .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1995, 117 (07) :2019-2023
[7]   MILLIMETER-WAVE SPECTROSCOPY OF BIOMOLECULES - ALANINE [J].
GODFREY, PD ;
FIRTH, S ;
HATHERLEY, LD ;
BROWN, RD ;
PIERLOT, AP .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1993, 115 (21) :9687-9691
[8]  
Gordy W., 1984, MICROWAVE MOL SPECTR
[9]   AN ELECTRON-DIFFRACTION STUDY OF GASEOUS ALPHA-ALANINE, NH2CHCH3CO2H [J].
IIJIMA, K ;
BEAGLEY, B .
JOURNAL OF MOLECULAR STRUCTURE, 1991, 248 (1-2) :133-142
[10]   MAIN CONFORMER OF GASEOUS GLYCINE - MOLECULAR-STRUCTURE AND ROTATIONAL BARRIER FROM ELECTRON-DIFFRACTION DATA AND ROTATIONAL-CONSTANTS [J].
IIJIMA, K ;
TANAKA, K ;
ONUMA, S .
JOURNAL OF MOLECULAR STRUCTURE, 1991, 246 (3-4) :257-266