Gap junction channels are regulated by gates that close with cytosolic acidification and transjunctional voltage (V-j). For identifying the connexin (Cx) domain(s) involved in channel gating, CO2 and V-j sensitivities of channels made of Cx38, Cx32, Cx32/Cx38 chimeras, and Cx32 mutants were studied in Xenopus oocyte pairs. Recently, we have reported that Cx38 is more sensitive to CO2 and V-j than Cx32 because of differences in the Cx inner loop. To identify the responsible inner loop domain, chimeras of Cx32/Cx38 in which the first (I-1) or the second (I-2) half of the inner loop of Cx38 replaced that of Cx32 and I-2 mutants of Cx32 were tested. The chimera Cx32/Cx38I(2) (Cx32 with I-2 of Cx38) was like Cx38 in CO2 sensitivity but like Cx32 in V-j sensitivity. Cx32/Cx38I(1) (Cx32 with I-1 of Cx38) did not express channels. Of the three Cx32 mutants, Cx32-VH/IR (VH of Cx32 replaced with IR of Cx38) and Cx32-WW/MC (WW of Cx32 replaced with MC of Cx38) were like Cx32 in both CO2 and V-j sensitivity, whereas Cx32-S*T/Q*P (S*T of Cx32 replaced with Q*P of Cx38) was closer to Cx38 in CO2 sensitivity but behaved like Cx32 in V-j gating. The data suggest that I-1 and I-2 contain domains relevant for V-j and CO2 gating, respectively.