What is the best crystal, size for collection of X-ray data?: Refinement of the structure of glycyl-L-serine based on data from a very large crystal

被引:93
作者
Görbitz, CH [1 ]
机构
[1] Univ Oslo, Dept Chem, N-0315 Oslo, Norway
来源
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE | 1999年 / 55卷
关键词
D O I
10.1107/S0108768199008721
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The dipeptide Gly-L-Ser was crystallized as part of a study on hydrogen-bonding patterns in the structures of dipeptides. Hydrogen-bond donors and accepters have been assigned ranks (1 is best, 2 is next best etc), and the observed hydrogen-bond connectivity is compared with the hypothetical pattern in which the rank n donor associates with the rank n acceptor (n = 1, 2,...), and with the pattern observed in the retroanalogue L-Ser-Gly, which contains the same functional groups. Crystallization of the title compound produced very bulky crystals. Rather than reducing the size of one of these before data collection, three data sets with different exposure times were collected with a Siemens SMART CCD diffractometer on a very large specimen (2.2 x 2.0 x 0.8 mm). The crystal was subsequently shaped into a 0.30 mm-diameter sphere for collection of two additional data sets. The discussion of the refinement results focus on the effect of absorption correction for the various data sets, and a comparison of geometrical and thermal parameters One advantage of using a large crystal, the great speed with which data can be obtained, has been exemplified by collection of a complete data set of good quality in less than 25 min.
引用
收藏
页码:1090 / 1098
页数:9
相关论文
共 16 条
[1]  
Allen F.H., 1993, CHEM AUTOMAT NEWS, V8, P31
[3]  
EGGLESTON DS, 1985, INT J PEPT PROT RES, V25, P242
[4]  
EGGLESTON DS, 1982, INT J PEPT PROT RES, V21, P206
[5]   ENCODING AND DECODING HYDROGEN-BOND PATTERNS OF ORGANIC-COMPOUNDS [J].
ETTER, MC .
ACCOUNTS OF CHEMICAL RESEARCH, 1990, 23 (04) :120-126
[6]  
GORBITZ CH, 1992, INT J PEPT PROT RES, V39, P93
[7]   Structures of L-valyl-L-glutamine and L-glutamyl-L-valine [J].
Gorbitz, CH ;
Backe, PH .
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 1996, 52 :999-1006
[8]   HYDROGEN-BOND DISTANCES AND ANGLES IN THE STRUCTURES OF AMINO-ACIDS AND PEPTIDES [J].
GORBITZ, CH .
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 1989, 45 :390-395
[9]   GLYCYL-D-THREONINE DIHYDRATE [J].
HO, P ;
LAI, TF ;
MARSH, RE .
JOURNAL OF CRYSTAL AND MOLECULAR STRUCTURE, 1979, 9 (04) :181-188
[10]   L-SERYLGLYCINE [J].
JONES, PG ;
FALVELLO, L ;
KENNARD, O .
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 1978, 34 (JUL) :2379-2381