GENTEX, a general multiscale model for in vivo tissue exchanges and intraorgan metabolism

被引:20
作者
Bassingthwaighte, James B.
Raymond, Gary M.
Ploger, Janies D.
Schwartz, Lisa M.
Bukowski, Thomas R.
机构
[1] Univ Washington, Dept Bioengn, Seattle, WA 98195 USA
[2] Uniformed Serv Univ Hlth Sci, Dept Physiol, Bethesda, MD 20814 USA
[3] Zymogenet Inc, Seattle, WA 98102 USA
来源
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES | 2006年 / 364卷 / 1843期
关键词
purine nucleoside metabolism; convection-diffusion-reaction model; GENTEX; axially distributed blood-tissue exchange processes; constrained parameter estimation; simultaneous optimization;
D O I
10.1098/rsta.2006.1779
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Endothelial cells lining myocardial capillaries not only impede transport of blood solutes to the contractile cells, but also take up and release substrates, competing with myocytes. Solutes permeating this barrier exhibit concentration gradients along the capillary. This paper introduces a generic model, GENTEX, to characterize blood-tissue exchanges. GENTEX is a whole organ model of the vascular network providing intraorgan flow heterogeneity and accounts for substrate transmembrane transport, binding and metabolism in erythrocytes, plasma, endothelial cells, interstitial space and cardiomyocytes. The model is tested here for the analysis of multiple tracer indicator dilution data on purine nucleoside metabolism in the isolated Krebs-Henseleit-perfused non-working hearts. It has been also used for analysing NMR contrast data for regional myocardial flows and for positron emission tomographic studies of cardiac receptor kinetics. The facilitating transporters, binding sites and enzymatic reactions are nonlinear elements and allow competition between substrates and a reaction sequence of up to five substrate-product reactions in a metabolic network. Strategies for application start with experiment designs incorporating inert reference tracers. For the estimation of endothelial and sarcolemmal permeability-surface area products and metabolism of the substrates and products, model solutions were optimized to fit the data from pairs of tracer injections (of either inosine or adenosine, plus the reference tracers) injected under the same circumstances a few minutes later. The results provide a self-consistent description of nucleoside metabolism in a beating well-perfused rabbit heart, and illustrate the power of the model to fit multiple datasets simultaneously.
引用
收藏
页码:1423 / 1442
页数:20
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