Novel techniques for weak alignment of proteins in solution using chemical tags coordinating lanthanide ions

被引:113
作者
Ikegami, T
Verdier, L
Sakhaii, P
Grimme, S
Pescatore, B
Saxena, K
Fiebig, KM
Griesinger, C
机构
[1] Goethe Univ Frankfurt, Max Planck Inst Biophys Chem, Dept NMR Based Struct Biol, D-37077 Gottingen, Germany
[2] Inst Organ Chem, D-60439 Frankfurt, Germany
[3] Affinium Phamraceut, Toronto, ON M5J 1V6, Canada
基金
日本学术振兴会;
关键词
dipolar coupling; disulfide bond; lanthanide ion; molecular alignment; NMR;
D O I
10.1023/B:JNMR.0000032611.72827.de
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A molecule with an anisotropic magnetic susceptibility is spontaneously aligned in a static magnetic field. Alignment of such a molecule yields residual dipolar couplings and pseudocontact shifts. Lanthanide ions have recently been successfully used to provide an anisotropic magnetic susceptibility in target molecules either by replacing a calcium ion with a lanthanide ion in calcium-binding proteins or by attaching an EDTA derivative to a cysteine residue via a disulfide bond. Here we describe a novel enantiomerically pure EDTA derived tag that aligns stronger due to its shorter linker and does not suffer from stereochemical diversity upon lanthanide complexation. We observed residual N-15, H-1-dipolar couplings of up to 8 Hz at 800 MHz induced by a single alignment tensor from this tag.
引用
收藏
页码:339 / 349
页数:11
相关论文
共 34 条
[1]   RAPID SYNTHESIS AND INTRODUCTION OF A PROTECTED EDTA-LIKE GROUP DURING THE SOLID-PHASE ASSEMBLY OF PEPTIDES [J].
ARYA, R ;
GARIEPY, J .
BIOCONJUGATE CHEMISTRY, 1991, 2 (05) :323-326
[2]   Utilization of site-directed spin labeling and high-resolution heteronuclear nuclear magnetic resonance for global fold determination of large proteins with limited nuclear overhauser effect data [J].
Battiste, JL ;
Wagner, G .
BIOCHEMISTRY, 2000, 39 (18) :5355-5365
[3]   Determination of internuclear angles of DNA using paramagnetic assisted magnetic alignment [J].
Beger, RD ;
Marathias, VM ;
Volkman, BF ;
Bolton, PH .
JOURNAL OF MAGNETIC RESONANCE, 1998, 135 (01) :256-259
[4]   Paramagnetism-based versus classical constraints:: An analysis of the solution structure of Ca Ln calbindin D9k [J].
Bertini, I ;
Donaire, A ;
Jiménez, B ;
Luchinat, C ;
Parigi, G ;
Piccioli, M ;
Poggi, L .
JOURNAL OF BIOMOLECULAR NMR, 2001, 21 (02) :85-98
[5]   Paramagnetic probes in metalloproteins [J].
Bertini, I ;
Luchinat, C ;
Piccioli, M .
NUCLEAR MAGNETIC RESONANCE OF BIOLOGICAL MACROMOLECULES, PT B, 2001, 339 :314-340
[6]   Magnetic susceptibility tenser anisotropies for a lanthanide ion series in a fixed protein matrix [J].
Bertini, I ;
Janik, MBL ;
Lee, YM ;
Luchinat, C ;
Rosato, A .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2001, 123 (18) :4181-4188
[7]  
Bertini I., 2001, CURRENT METHODS INOR, V2
[8]   De Novo determination of bond orientations and order parameters from residual dipolar couplings with high accuracy [J].
Briggman, KB ;
Tolman, JR .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2003, 125 (34) :10164-10165
[9]   PROTON SPIN RELAXATION FOR THE NON-LABILE COORDINATED CHELATE IN LANTHANIDE SHIFT-REAGENTS [J].
BURNS, PD ;
LAMAR, GN .
JOURNAL OF MAGNETIC RESONANCE, 1982, 46 (01) :61-68
[10]   New methods of structure refinement for macromolecular structure determination by NMR [J].
Clore, GM ;
Gronenborn, AM .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1998, 95 (11) :5891-5898