Structure of the S15,S18-rRNA complex: Assembly of the 30S ribosome central domain

被引:177
作者
Agalarov, SC
Prasad, GS
Funke, PM
Stout, CD [1 ]
Williamson, JR
机构
[1] Scripps Res Inst, Dept Mol Biol, La Jolla, CA 92037 USA
[2] Scripps Res Inst, Skaggs Inst Chem Biol, La Jolla, CA 92037 USA
[3] Russian Acad Sci, Inst Prot Res, Pushchino 142292, Russia
[4] MIT, Dept Chem, Cambridge, MA 02139 USA
关键词
D O I
10.1126/science.288.5463.107
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The crystal structure of a 70-kilodalton ribonucleoprotein complex from the central domain of the Thermus thermophilus 30S ribosomal subunit was solved at 2.6 angstrom resolution. The complex consists of a 104-nucleotide RNA fragment composed of two three-helix junctions that Lie at the end of a central helix, and the ribosomal proteins S15, S6, and S18. S15 binds the ribosomal RNA early in the assembly of the 30S ribosomal subunit, stabilizing a conformational reorganization of the two three-helix junctions that creates the RNA fold necessary for subsequent binding of S6 and S18. The structure of the complex demonstrates the central role of S15-induced reorganization of central domain RNA for the subsequent steps of ribosome assembly.
引用
收藏
页码:107 / 112
页数:6
相关论文
共 33 条
[1]  
AGALAROV AS, UNPUB
[2]   A hierarchy of RNA subdomains in assembly of the central domain of the 30 S ribosomal subunit [J].
Agalarov, SC ;
Williamson, JR .
RNA, 2000, 6 (03) :402-408
[3]   In vitro assembly of a ribonucleoprotein particle corresponding to the platform domain of the 30S ribosomal subunit [J].
Agalarov, SC ;
Zheleznyakova, EN ;
Selivanova, OM ;
Zheleznaya, LA ;
Matvienko, NI ;
Vasiliev, VD ;
Spirin, AS .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1998, 95 (03) :999-1003
[4]   Placement of protein and RNA structures into a 5 Å-resolution map of the 50S ribosomal subunit [J].
Ban, N ;
Nissen, P ;
Hansen, J ;
Capel, M ;
Moore, PB ;
Steitz, TA .
NATURE, 1999, 400 (6747) :841-847
[5]   Interaction of the Bacillus stearothermophilus ribosomal protein S15 with 16 S rRNA .2. Specificity determinants of RNA-protein recognition [J].
Batey, RT ;
Williamson, JR .
JOURNAL OF MOLECULAR BIOLOGY, 1996, 261 (04) :550-567
[6]   Effects of polyvalent cations on the folding of an rRNA three-way junction and binding of ribosomal protein S15 [J].
Batey, RT ;
Williamson, JR .
RNA, 1998, 4 (08) :984-997
[7]   Interaction of the Bacillus stearothermophilus ribosomal protein S15 with 16 S rRNA .1. Defining the minimal RNA site [J].
Batey, RT ;
Williamson, JR .
JOURNAL OF MOLECULAR BIOLOGY, 1996, 261 (04) :536-549
[8]   Solution structure of the ribosomal RNA binding protein S15 from Thermus thermophilus [J].
Berglund, H ;
Rak, A ;
Serganov, A ;
Garber, M ;
Hard, T .
NATURE STRUCTURAL BIOLOGY, 1997, 4 (01) :20-23
[9]   Crystallography & NMR system:: A new software suite for macromolecular structure determination [J].
Brunger, AT ;
Adams, PD ;
Clore, GM ;
DeLano, WL ;
Gros, P ;
Grosse-Kunstleve, RW ;
Jiang, JS ;
Kuszewski, J ;
Nilges, M ;
Pannu, NS ;
Read, RJ ;
Rice, LM ;
Simonson, T ;
Warren, GL .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1998, 54 :905-921
[10]   POSITIONS OF S2, S13, S16, S17, S19 AND S21 IN THE 30-S-RIBOSOMAL SUBUNIT OF ESCHERICHIA-COLI [J].
CAPEL, MS ;
KJELDGAARD, M ;
ENGELMAN, DM ;
MOORE, PB .
JOURNAL OF MOLECULAR BIOLOGY, 1988, 200 (01) :65-87