Prospecting for biocatalysts and drugs in the genomes of non-cultured microorganisms

被引:83
作者
Streit, WR
Daniel, R
Jaeger, KE
机构
[1] Univ Gottingen, Inst Mikrobiol & Genet, D-37077 Gottingen, Germany
[2] Univ Duisburg Essen, Inst Grenzflachenbiotechnol, D-47057 Duisburg, Germany
[3] Univ Dusseldorf, Inst Mol Enzymtechnol, Forschungszentrum, D-52426 Julich, Germany
关键词
D O I
10.1016/j.copbio.2004.05.006
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Modern biotechnology has a steadily increasing demand for vitamins, antibiotics and, in particular, novel biocatalysts for use in the production of flavors, agrochemicals, pharmaceuticals and high-value fine chemicals. Novel experimental approaches are being developed in attempts to identify such molecules. However, it is known that up to 99.8% of the microbes present in many environments are not readily culturable; hence, they cannot be exploited for biotechnology. The 'metagenome technology' offers a solution to this problem by developing culture-independent methods to isolate, clone and express environmental DNA. So far, metagenome-based approaches have led to the isolation of many novel biocatalysts and a variety of other molecules with a high potential for downstream applications.
引用
收藏
页码:285 / 290
页数:6
相关论文
共 45 条
[1]   PHYLOGENETIC IDENTIFICATION AND IN-SITU DETECTION OF INDIVIDUAL MICROBIAL-CELLS WITHOUT CULTIVATION [J].
AMANN, RI ;
LUDWIG, W ;
SCHLEIFER, KH .
MICROBIOLOGICAL REVIEWS, 1995, 59 (01) :143-169
[2]   Comparative genomic analysis of archaeal genotypic variants in a single population and in two different oceanic provinces [J].
Béjà, O ;
Koonin, EV ;
Aravind, L ;
Taylor, LT ;
Seitz, H ;
Stein, JL ;
Bensen, DC ;
Feldman, RA ;
Swanson, RV ;
DeLong, EF .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2002, 68 (01) :335-345
[3]   Construction and analysis of bacterial artificial chromosome libraries from a marine microbial assemblage [J].
Béjà, O ;
Suzuki, MT ;
Koonin, EV ;
Aravind, L ;
Hadd, A ;
Nguyen, LP ;
Villacorta, R ;
Amjadi, M ;
Garrigues, C ;
Jovanovich, SB ;
Feldman, RA ;
DeLong, EF .
ENVIRONMENTAL MICROBIOLOGY, 2000, 2 (05) :516-529
[4]   Prospecting for novel lipase genes using PCR [J].
Bell, PJL ;
Sunna, A ;
Gibbs, MD ;
Curach, NC ;
Nevalainen, H ;
Bergquist, PL .
MICROBIOLOGY-SGM, 2002, 148 :2283-2291
[5]   Synthesis of long-chain fatty acid enol esters isolated from an environmental DNA clone [J].
Brady, SF ;
Clardy, J .
ORGANIC LETTERS, 2003, 5 (02) :121-124
[6]   New natural product families from an environmental DNA (eDNA) gene cluster [J].
Brady, SF ;
Chao, CJ ;
Clardy, J .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2002, 124 (34) :9968-9969
[7]   Cloning and heterologous expression of a natural product biosynthetic gene cluster from eDNA [J].
Brady, SF ;
Chao, CJ ;
Handelsman, J ;
Clardy, J .
ORGANIC LETTERS, 2001, 3 (13) :1981-1984
[8]   Synergy and contingency as driving forces for the evolution of multiple secondary metabolite production by Streptomyces species [J].
Challis, GL ;
Hopwood, DA .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 :14555-14561
[9]  
Cottrell MT, 1999, APPL ENVIRON MICROB, V65, P2553
[10]   Recombinant environmental libraries provide access to microbial diversity for drug discovery from natural products [J].
Courtois, S ;
Cappellano, CM ;
Ball, M ;
Francou, FX ;
Normand, P ;
Helynck, G ;
Martinez, A ;
Kolvek, SJ ;
Hopke, J ;
Osburne, MS ;
August, PR ;
Nalin, R ;
Guérineau, M ;
Jeannin, P ;
Simonet, P ;
Pernodet, JL .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2003, 69 (01) :49-55