The fibronectin type 3-like repeat from the Clostridium thermocellum cellobiohydrolase CbhA promotes hydrolysis of cellulose by modifying its surface

被引:151
作者
Kataeva, IA
Seidel, RD
Shah, A
West, LT
Li, XL
Ljungdahl, LG
机构
[1] Univ Georgia, Dept Biochem & Mol Biol, Athens, GA 30602 USA
[2] Univ Georgia, Ctr Biol Resource Recovery, Athens, GA 30602 USA
[3] Univ Georgia, Complex Carbohydrate Res Ctr, Athens 30602, Greece
[4] Univ Georgia, Dept Crop & Soil Sci, Athens, GA 30602 USA
[5] USDA ARS, Natl Ctr Agr Utilizat Res, Peoria, IL 61604 USA
关键词
D O I
10.1128/AEM.68.9.4292-4300.2002
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Fibronectin type 3 homology domains (Fn3) as found in the cellobiohydrolase CbhA of Clostridium thermocellum are common among bacterial extracellular glycohydrolases. The function of these domains is not clear. CbhA is modular and composed of an N-terminal family IV carbohydrate-binding domain (CBDIV), an immunoglobulin-like domain, a family 9 glycosyl hydrolase catalytic domain (Gh9), two Fn3-like domains (Fn3(1,2)), a family III carbohydrate-binding domain (CBDIII), and a dockerin domain. Efficiency of cellulose hydrolysis by truncated forms of CbhA increased in the following order: Gh9 (lowest efficiency), Gh9-Fn3(1,2) (more efficient), and Gh9-Fn3(1,2)-CBDIII (greatest efficiency). Thermostability of the above constructs decreased in the following order: Gh9 (most stable), Gh9-Fn3(1,2), and then Gh9-Fn3(1,2)-CBDIII (least stable). Mixing of Orpinomyces endoglucanase WE with Fn3(1,2), or Fn3(1,2)-CBDIII increased efficiency of hydrolysis of acid-swollen cellulose (ASC) and filter paper. Scanning electron microscopic studies of filter paper treated with Fn3(1,2), Fn3(1,2)- CBDIII, or CBDIII showed that the surface of the cellulose fibers had been loosened up and crenellated by Fn3(1,2) and Fn3(1,2)-CBDIII and to a lesser extent by CBDIII. X-ray diffraction analysis did not reveal changes in the crystallinity of the filter paper. CBDIII bound to ASC and filter paper with capacities of 2.45 and 0.73 mumoles g(-1) and relative affinities (K,.) of 1.12 and 2.13 liters g(-1), respectively. Fn3(1,2) bound weakly to both celluloses. Fn3(1,2)-CBD bound to ASC and filter paper with capacities of 3.22 and 0.81 p,moles g(-1) and K(r)s of 1.14 and 1.98 liters g-1, respectively. Fn3(1,2) and CBDIII contained 2 and 1 mol of calcium per mol, respectively. The results suggest that Fn3(1,2) aids the hydrolysis of cellulose by modifying its surface. This effect is enhanced by the presence of CBDIII, which increases the concentration of Fn3(1,2) on the cellulose surface.
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收藏
页码:4292 / 4300
页数:9
相关论文
共 38 条
[1]   Cellulosomes - Structure and ultrastructure [J].
Bayer, EA ;
Shimon, LJW ;
Shoham, Y ;
Lamed, R .
JOURNAL OF STRUCTURAL BIOLOGY, 1998, 124 (2-3) :221-234
[2]   The cellulosome: An exocellular, multiprotein complex specialized in cellulose degradation [J].
Beguin, P ;
Lemaire, M .
CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY, 1996, 31 (03) :201-236
[3]   Feruloyl esterase activity of the Clostridium thermocellum cellulosome can be attributed to previously unknown domains of XynY and XynZ [J].
Blum, DL ;
Kataeva, IA ;
Li, XL ;
Ljungdahl, LG .
JOURNAL OF BACTERIOLOGY, 2000, 182 (05) :1346-1351
[4]   CRYSTAL-STRUCTURE OF DOMAIN-3 AND DOMAIN-4 OF RAT CD4 - RELATION TO THE NH2-TERMINAL DOMAINS [J].
BRADY, RL ;
DODSON, EJ ;
DODSON, GG ;
LANGE, G ;
DAVIS, SJ ;
WILLIAMS, AF ;
BARCLAY, AN .
SCIENCE, 1993, 260 (5110) :979-983
[5]   BUILDING PROTEINS WITH FIBRONECTIN TYPE-III MODULES [J].
CAMPBELL, ID ;
SPITZFADEN, C .
STRUCTURE, 1994, 2 (05) :333-337
[6]   Exploring the reaction kinetics of whey protein denaturation/aggregation by assuming the denaturation step is reversible [J].
Chen, XD ;
Chen, ZD ;
Nguang, SK ;
Anema, S .
BIOCHEMICAL ENGINEERING JOURNAL, 1998, 2 (01) :63-69
[7]   NON-HYDROLYTIC DISRUPTION OF CELLULOSE FIBERS BY THE BINDING DOMAIN OF A BACTERIAL CELLULASE [J].
DIN, N ;
GILKES, NR ;
TEKANT, B ;
MILLER, RC ;
WARREN, AJ ;
KILBURN, DG .
BIO-TECHNOLOGY, 1991, 9 (11) :1096-1099
[8]   THE CELLULOSOME - THE EXOCELLULAR ORGANELLE OF CLOSTRIDIUM [J].
FELIX, CR ;
LJUNGDAHL, LG .
ANNUAL REVIEW OF MICROBIOLOGY, 1993, 47 :791-819
[9]  
GILKES NR, 1992, J BIOL CHEM, V267, P6743
[10]   DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae [J].
Heidelberg, JF ;
Eisen, JA ;
Nelson, WC ;
Clayton, RA ;
Gwinn, ML ;
Dodson, RJ ;
Haft, DH ;
Hickey, EK ;
Peterson, JD ;
Umayam, L ;
Gill, SR ;
Nelson, KE ;
Read, TD ;
Tettelin, H ;
Richardson, D ;
Ermolaeva, MD ;
Vamathevan, J ;
Bass, S ;
Qin, HY ;
Dragoi, I ;
Sellers, P ;
McDonald, L ;
Utterback, T ;
Fleishmann, RD ;
Nierman, WC ;
White, O ;
Salzberg, SL ;
Smith, HO ;
Colwell, RR ;
Mekalanos, JJ ;
Venter, JC ;
Fraser, CM .
NATURE, 2000, 406 (6795) :477-483