Crystallization and preliminary diffraction studies of two quinoprotein alcohol dehydrogenases (ADHs):: a soluble monomeric ADH from Pseudomonas putida HK5 (ADH-IIB) and a heterotrimeric membrane-bound ADH from Gluconobacter suboxydans (ADH-GS)

被引:6
作者
Chen, ZW
Baruch, P
Mathews, FS [1 ]
Matsushita, K
Yamashita, T
Toyama, H
Adachi, O
机构
[1] Washington Univ, Dept Biochem & Mol Biophys, St Louis, MO 63130 USA
[2] Yamaguchi Univ, Dept Biol Chem, Yamaguchi, Japan
来源
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY | 1999年 / 55卷
关键词
D O I
10.1107/S0907444999010744
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Crystals of a soluble monomeric quinocytochrome alcohol dehydrogenase (ADH-IIB) and of a trimeric membrane-associated quinocytochrome alcohol dehydrogenase (ADH-GS) have been obtained. The ADH-IIB crystals are triclinic, with one monomer in the unit cell, and were obtained in the presence of PEG 8000, sodium citrate, HEPES buffer and 2-propanol. X-ray data were collected at 110 K to 1.9 Angstrom resolution (R-merge = 6.4%) and the orientation of a methanol dehydrogenase search molecule (from Methylophilus methylotrophus W3A1) was obtained by molecular replacement. Preliminary refinement of this model (10.0-3.0 Angstrom resolution, R = 0.37, R-free = 0.40) led to tentative identification of the two highest peaks in a native anomalous difference Fourier map as the Fe atom of the heme and a calcium ion interacting with the PQQ prosthetic group. The ADH-GS crystals are tetragonal, displaying six similar lattices, both primitive and centered, and were grown by the sitting-drop method after replacement of Triton X-100 by dodecylmaltoside or octaethylene glycol monododecyl ether in the presence of ammonium sulfate and sodium acetate buffer, with and without PEG 3500 and calcium ion. The best diffraction is obtained at 110 K where the resolution extends to about 4 Angstrom in the a and b directions and about 3 Angstrom in the c direction.
引用
收藏
页码:1933 / 1936
页数:4
相关论文
共 21 条
[1]   NUCLEOTIDE-SEQUENCE OF THE METHYLOBACTERIUM-EXTORQUENS AM1 MOXF AND MOXJ GENES INVOLVED IN METHANOL OXIDATION [J].
ANDERSON, DJ ;
MORRIS, CJ ;
NUNN, DN ;
ANTHONY, C ;
LIDSTROM, ME .
GENE, 1990, 90 (01) :173-176
[2]  
[Anonymous], [No title captured]
[3]  
ANTHONY C, 1993, PRINCIPLES APPL QUIN, P17
[4]  
Brunger A. T., 1992, X PLOR VERSION 3 1 S
[5]   Structure of the quinoprotein glucose dehydrogenase of Escherichia coli modelled on that of methanol dehydrogenase from Methylobacterium extorquens [J].
Cozier, GE ;
Anthony, C .
BIOCHEMICAL JOURNAL, 1995, 312 :679-685
[6]   THE REFINED STRUCTURE OF THE QUINOPROTEIN METHANOL DEHYDROGENASE FROM METHYLOBACTERIUM-EXTORQUENS AT 1.94 ANGSTROM [J].
GHOSH, M ;
ANTHONY, C ;
HARLOS, K ;
GOODWIN, MG ;
BLAKE, C .
STRUCTURE, 1995, 3 (02) :177-187
[7]   QUINOHEMOPROTEIN ALCOHOL-DEHYDROGENASE APOENZYME FROM PSEUDOMONAS-TESTOSTERONI [J].
GROEN, BW ;
VANKLEEF, MAG ;
DUINE, JA .
BIOCHEMICAL JOURNAL, 1986, 234 (03) :611-615
[8]   CLONING AND SEQUENCING OF THE GENE ENCODING THE 72-KILODALTON DEHYDROGENASE SUBUNIT OF ALCOHOL-DEHYDROGENASE FROM ACETOBACTER-ACETI [J].
INOUE, T ;
SUNAGAWA, M ;
MORI, A ;
IMAI, C ;
FUKUDA, M ;
TAKAGI, M ;
YANO, K .
JOURNAL OF BACTERIOLOGY, 1989, 171 (06) :3115-3122
[9]   SPARSE-MATRIX SAMPLING - A SCREENING METHOD FOR CRYSTALLIZATION OF PROTEINS [J].
JANCARIK, J ;
KIM, SH .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1991, 24 :409-411
[10]   Characterization of the genes encoding the three-component membrane-bound alcohol dehydrogenase from Gluconobacter suboxydans and their expression in Acetobacter pasteurianus [J].
Kondo, K ;
Horinouchi, S .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1997, 63 (03) :1131-1138