An information theory model of hydrophobic interactions

被引:512
作者
Hummer, G
Garde, S
Garcia, AE
Pohorille, A
Pratt, LR
机构
[1] LOS ALAMOS NATL LAB, DIV THEORET, LOS ALAMOS, NM 87545 USA
[2] UNIV CALIF SAN FRANCISCO, DEPT PHARMACEUT CHEM, SAN FRANCISCO, CA 94143 USA
[3] NASA, AMES RES CTR, MOFFETT FIELD, CA 94035 USA
关键词
solvation; hydrophobic effects; biomolecule solution structure;
D O I
10.1073/pnas.93.17.8951
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
A molecular model of poorly understood hydrophobic effects is heuristically developed using the methods of information theory, Because primitive hydrophobic effects can be tied to the probability of observing a molecular-sized cavity in the solvent, the probability distribution of the number of solvent centers in a cavity volume is modeled on the basis of the two moments available from the density and radial distribution of oxygen atoms in liquid water. The modeled distribution then yields the probability that no solvent centers are found in the cavity volume, This model is shown to account quantitatively for the central hydrophobic phenomena of cavity formation and association of inert gas solutes. The connection of information theory to statistical thermodynamics provides a basis for clarification of hydrophobic effects. The simplicity and flexibility of the approach suggest that it should permit applications to conformational equilibria of nonpolar solutes and hydrophobic residues in biopolymers.
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页码:8951 / 8955
页数:5
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