Ab initio determination of the ionization potentials of DNA and RNA nucleobases

被引:131
作者
Roca-Sanjuan, Daniel [1 ]
Rubio, Mercedes [1 ]
Merchan, Manuela [1 ]
Serrano-Andres, Luis [1 ]
机构
[1] Univ Valencia, Inst Ciencia Mol, ES-46071 Valencia, Spain
关键词
D O I
10.1063/1.2336217
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Quantum chemical high level ab initio coupled-cluster and multiconfigurational perturbation methods have been used to compute vertical and adiabatic ionization potentials of the five canonical DNA and RNA nucleobases: uracil, thymine, cytosine, adenine, and guanine. Several states of their cations have been also calculated. The present results represent a systematic compendium of these magnitudes, establishing theoretical reference values at a level not reported before, calibrating computational strategies, and guiding the assignment of the features in the experimental photoelectron spectra. (c) 2006 American Institute of Physics.
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页数:7
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共 54 条
[1]   2ND-ORDER PERTURBATION-THEORY WITH A COMPLETE ACTIVE SPACE SELF-CONSISTENT FIELD REFERENCE FUNCTION [J].
ANDERSSON, K ;
MALMQVIST, PA ;
ROOS, BO .
JOURNAL OF CHEMICAL PHYSICS, 1992, 96 (02) :1218-1226
[2]  
ANDERSSON K, 2004, MOLCAS VERSION 6 0
[3]   Calculation of electron impact ionization cross sections of DNA using the Deutsch-Mark and Binary-Encounter-Bethe formalisms [J].
Bernhardt, P ;
Paretzke, HG .
INTERNATIONAL JOURNAL OF MASS SPECTROMETRY, 2003, 223 (1-3) :599-611
[4]  
Bonnett Alastair., 2000, ANTIRACISM
[5]   Calculation of the ionization potentials of the DNA bases in aqueous medium [J].
Close, DM .
JOURNAL OF PHYSICAL CHEMISTRY A, 2004, 108 (46) :10376-10379
[6]   Oxidative damage to cytosine: Implication for the study of radiation-induced damage to DNA [J].
Close, DM .
JOURNAL OF PHYSICAL CHEMISTRY B, 2003, 107 (03) :864-867
[7]   ABINITIO MOLECULAR-ORBITAL CALCULATIONS ON DNA-BASE PAIR RADICAL IONS - EFFECT OF BASE-PAIRING ON PROTON-TRANSFER ENERGIES, ELECTRON-AFFINITIES, AND IONIZATION-POTENTIALS [J].
COLSON, AO ;
BESLER, B ;
SEVILLA, MD .
JOURNAL OF PHYSICAL CHEMISTRY, 1992, 96 (24) :9787-9794
[8]   STRUCTURE AND RELATIVE STABILITY OF DEOXYRIBOSE RADICALS IN A MODEL DNA BACKBONE - AB-INITIO MOLECULAR-ORBITAL CALCULATIONS [J].
COLSON, AO ;
SEVILLA, MD .
JOURNAL OF PHYSICAL CHEMISTRY, 1995, 99 (11) :3867-3874
[9]   Ab initio ionization energy thresholds of DNA and RNA bases in gas phase and in aqueous solution [J].
Crespo-Hernández, CE ;
Arce, R ;
Ishikawa, Y ;
Gorb, L ;
Leszczynski, J ;
Close, DM .
JOURNAL OF PHYSICAL CHEMISTRY A, 2004, 108 (30) :6373-6377
[10]  
Crespo-Hernández CE, 2002, PHOTOCHEM PHOTOBIOL, V76, P259, DOI 10.1562/0031-8655(2002)076<0259:PODARB>2.0.CO