Genomewide linkage disequilibrium mapping of severe bipolar disorder in a population isolate

被引:55
作者
Ophoff, RA
Escamilla, MA
Service, SK
Spesny, M
Meshi, D
Poon, W
Molina, J
Fournier, E
Gallegos, A
Mathews, C
Neylan, T
Batki, SL
Roche, E
Ramirez, M
Silva, S
De Mille, MC
Dong, P
Leon, PE
Reus, VI
Sandkuijl, LA
Freimer, NB
机构
[1] Univ Calif San Francisco, Dept Psychiat, San Francisco, CA 94143 USA
[2] Univ Calif San Francisco, Ctr Neurobiol & Psychiat, San Francisco, CA 94143 USA
[3] Univ Calif San Francisco, San Francisco Gen Hosp, Dept Psychiat, San Francisco, CA 94143 USA
[4] Univ Calif San Francisco, Vet Adm Med Ctr, Dept Psychiat, San Francisco, CA 94143 USA
[5] Univ Calif San Francisco, Neurogenet Lab, San Francisco, CA 94143 USA
[6] Univ Costa Rica, Ctr Biol Mol & Celular, San Jose, Costa Rica
[7] Hosp Calderon Guardia, San Jose, Costa Rica
[8] Univ Costa Rica, Escuela Med, San Jose, Costa Rica
[9] Ctr Int Control Estres, Guatemala City, Guatemala
[10] Appl Biosyst Inc, Foster City, CA USA
[11] Leiden Univ, Ctr Med, Dept Med Stat, Leiden, Netherlands
基金
美国国家卫生研究院;
关键词
D O I
10.1086/342291
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Genomewide association studies may offer the best promise for genetic mapping of complex traits. Such studies in outbred populations require very densely spaced single-nucleotide polymorphisms. In recently founded population isolates, however, extensive linkage disequilibrium (LD) may make these studies feasible with currently available sets of short tandem repeat markers, spaced at intervals as large as a few centimorgans. We report the results of a genomewide association study of severe bipolar disorder (BP-I), using patients from the isolated population of the central valley of Costa Rica. We observed LD with BP-I on several chromosomes; the most striking results were in proximal 8p, a region that has previously shown linkage to schizophrenia. This region could be important for severe psychiatric disorders, rather than for a specific phenotype.
引用
收藏
页码:565 / 574
页数:10
相关论文
共 33 条
[1]   CONTROLLING THE FALSE DISCOVERY RATE - A PRACTICAL AND POWERFUL APPROACH TO MULTIPLE TESTING [J].
BENJAMINI, Y ;
HOCHBERG, Y .
JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY, 1995, 57 (01) :289-300
[2]   Schizophrenia susceptibility loci on chromosomes 13q32 and 8p21 [J].
Blouin, JL ;
Dombroski, BA ;
Nath, SK ;
Lasseter, VK ;
Wolyniec, PS ;
Nestadt, G ;
Thornquist, M ;
Ullrich, G ;
McGrath, J ;
Kasch, L ;
Lamacz, M ;
Thomas, MG ;
Gehrig, C ;
Radhakrishna, U ;
Snyder, SE ;
Balk, KG ;
Neufeld, K ;
Swartz, KL ;
DeMarchi, N ;
Papadimitriou, GN ;
Dikeos, DG ;
Stefanis, CN ;
Chakravarti, A ;
Childs, B ;
Housman, DE ;
Kazazian, HH ;
Antonarakis, SE ;
Pulver, AE .
NATURE GENETICS, 1998, 20 (01) :70-73
[3]   Comprehensive human genetic maps: Individual and sex-specific variation in recombination [J].
Broman, KW ;
Murray, JC ;
Sheffield, VC ;
White, RL ;
Weber, JL .
AMERICAN JOURNAL OF HUMAN GENETICS, 1998, 63 (03) :861-869
[4]  
Brzustowicz LM, 1999, AM J HUM GENET, V65, P1096, DOI 10.1086/302579
[5]   Linkage disequilibrium mapping: The role of population history, size, and structure [J].
Chapman, NH ;
Thompson, EA .
GENETIC DISSECTION OF COMPLEX TRAITS, 2001, 42 :413-437
[6]   A comprehensive genetic map of the human genome based on 5,264 microsatellites [J].
Dib, C ;
Faure, S ;
Fizames, C ;
Samson, D ;
Drouot, N ;
Vignal, A ;
Millasseau, P ;
Marc, S ;
Hazan, J ;
Seboun, E ;
Lathrop, M ;
Gyapay, G ;
Morissette, J ;
Weissenbach, J .
NATURE, 1996, 380 (6570) :152-154
[7]  
Escamilla MA, 1996, AM J MED GENET, V67, P244, DOI 10.1002/(SICI)1096-8628(19960531)67:3<244::AID-AJMG2>3.3.CO
[8]  
2-8
[9]   Assessing the feasibility of linkage disequilibrium methods for mapping complex traits: An initial screen for bipolar disorder loci on chromosome 18 [J].
Escamilla, MA ;
McInnes, LA ;
Spesny, M ;
Reus, VI ;
Service, SK ;
Shimayoshi, N ;
Tyler, DJ ;
Silva, S ;
Molina, J ;
Gallegos, A ;
Meza, L ;
Cruz, ML ;
Batki, S ;
Vinogradov, S ;
Neylan, T ;
Nguyen, JB ;
Fournier, E ;
Araya, C ;
Barondes, SH ;
Leon, P ;
Sandkuijl, LA ;
Freimer, NB .
AMERICAN JOURNAL OF HUMAN GENETICS, 1999, 64 (06) :1670-1678
[10]   Genome screening for linkage disequilibrium in a Costa Rican sample of patients with bipolar-I disorder: A follow-up study on chromosome 18 [J].
Escamilla, MA ;
McInnes, LA ;
Service, SK ;
Spesny, M ;
Reus, VI ;
Molina, J ;
Gallegos, A ;
Fournier, E ;
Batki, S ;
Neylan, T ;
Matthews, C ;
Vinogradov, S ;
Roche, E ;
Tyler, DJ ;
Shimayoshi, N ;
Mendez, R ;
Ramirez, R ;
Ramirez, M ;
Araya, C ;
Araya, X ;
Leon, PE ;
Sandkuijl, LA ;
Freimer, NB .
AMERICAN JOURNAL OF MEDICAL GENETICS, 2001, 105 (02) :207-213