This work evaluated the spatial variability and distribution of heterogeneous hydraulic conductivity (K) ill the Choushui River alluvial fan in Taiwan, using ordinary kriging (OK) and mean and individual sequential Gaussian simulations (SGS). A baseline flow model constructed by upscaling parameters was inversely calibrated to determine the pumping and recharge rates. Simulated heads using different K realizations were then compared with historically measured heads. A global/local simulated error between simulated and measured heads was analysed to assess the different spatial variabilities of various estimated K distributions. The results of a MODFLOW simulation indicate that the OK realization had the smallest sum of absolute mean simulation errors (SAMSE) and the SGS realizations preserved the spatial variability of the measured K fields. Moreover, the SAMSE increases as the spatial variability of the K field increases. The OK realization yields small local simulation errors in the measured K field of moderate magnitude, whereas the SGS realizations have small local simulation errors in the measured K fields, with hi,,h and low values. The OK realization of K can be applied to perform a deterministic inverse calibration. The mean SGS method is suggested for constructing a K field when the application focuses on extreme values of estimated parameters and S mall calibration errors, such as in a simulation of contaminant transport in heterogeneous aquifers. The individual SGS realization is useful in stochastically assessing the spatial uncertainty of highly heterogeneous aquifers. Copyright (C) 2004 John Wiley Sons, Ltd.