Application of cascade correlation networks for structures to chemistry

被引:63
作者
Bianucci, AM
Micheli, A
Sperduti, A
Starita, A
机构
[1] Dipartimento Sci Farmaceut, I-56126 Pisa, Italy
[2] Univ Pisa, Dipartimento Informat, I-56125 Pisa, Italy
关键词
Cascade Correlation networks; constructive algorithms; gradient descent; QSPR; QSAR;
D O I
10.1023/A:1008368105614
中图分类号
TP18 [人工智能理论];
学科分类号
081104 [模式识别与智能系统]; 0812 [计算机科学与技术]; 0835 [软件工程]; 1405 [智能科学与技术];
摘要
We present the application of Cascade Correlation for structures to QSPR (quantitative structure-property relationships) and QSAR (quantitative structure-activity relationships) analysis. Cascade Correlation for structures is a neural network model recently proposed for the processing of structured data. This allows the direct treatment of chemical compounds as labeled trees, which constitutes a novel approach to QSPR/QSAR. We report the results obtained for QSPR on Alkanes (predicting the boiling point) and QSAR of a class of Benzodiazepines. Our approach compares favorably versus the traditional QSAR treatment based on equations and it is competitive with 'ad hoc' MLPs for the QSPR problem.
引用
收藏
页码:117 / 146
页数:30
相关论文
共 36 条
[1]
A UNIFIED FRAMEWORK FOR USING NEURAL NETWORKS TO BUILD QSARS [J].
AJAY .
JOURNAL OF MEDICINAL CHEMISTRY, 1993, 36 (23) :3565-3571
[2]
[Anonymous], CMUCS91100
[3]
NEURAL NETWORKS APPLIED TO PHARMACEUTICAL PROBLEMS .3. NEURAL NETWORKS APPLIED TO QUANTITATIVE STRUCTURE ACTIVITY RELATIONSHIP ANALYSIS [J].
AOYAMA, T ;
SUZUKI, Y ;
ICHIKAWA, H .
JOURNAL OF MEDICINAL CHEMISTRY, 1990, 33 (09) :2583-2590
[4]
Barysz M., 1983, CHEM APPL TOPOLOGY G, P222
[5]
Bianucci AM, 1998, IEEE WORLD CONGRESS ON COMPUTATIONAL INTELLIGENCE, P117, DOI 10.1109/IJCNN.1998.682247
[6]
FEEDFORWARD NEURAL NETWORKS IN CHEMISTRY - MATHEMATICAL SYSTEMS FOR CLASSIFICATION AND PATTERN-RECOGNITION [J].
BURNS, JA ;
WHITESIDES, GM .
CHEMICAL REVIEWS, 1993, 93 (08) :2583-2601
[7]
USE OF A NEURAL-NETWORK TO DETERMINE THE BOILING-POINT OF ALKANES [J].
CHERQAOUI, D ;
VILLEMIN, D .
JOURNAL OF THE CHEMICAL SOCIETY-FARADAY TRANSACTIONS, 1994, 90 (01) :97-102
[8]
Toward a principled methodology for neural network design and performance evaluation in QSAR. Application to the prediction of LogP [J].
Duprat, AF ;
Huynh, T ;
Dreyfus, G .
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 1998, 38 (04) :586-594
[9]
APPLICATIONS OF NEURAL NETWORKS IN CHEMISTRY .1. PREDICTION OF ELECTROPHILIC AROMATIC-SUBSTITUTION REACTIONS [J].
ELROD, DW ;
MAGGIORA, GM ;
TRENARY, RG .
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 1990, 30 (04) :477-484
[10]
Fahlman S., 1990, ADV NEURAL INFORMATI, V2, P524