Common single nucleotide polymorphisms in TCF7L2 are reproducibly associated with type 2 diabetes and reduce the insulin response to glucose in nondiabetic individuals

被引:304
作者
Saxena, Richa
Gianniny, Lauren
Burtt, Noel P.
Lyssenko, Valeriya
Giuducci, Candace
Sjogren, Marketa
Florez, Jose C.
Almgren, Peter
Isomaa, Bo
Orho-Melander, Marju
Lindblad, Ulf
Daly, Mark J.
Tuomi, Tiinamaija
Hirschhorn, Joel N.
Ardlie, Kristin G.
Groop, Leif C.
Altshuler, David
机构
[1] MIT, Cambridge, MA 02139 USA
[2] Harvard Univ, Broad Inst, Program Med & Populat Genet, Cambridge, MA 02138 USA
[3] Massachusetts Gen Hosp, Ctr Human Genet Res, Boston, MA 02114 USA
[4] Massachusetts Gen Hosp, Dept Mol Biol, Boston, MA 02114 USA
[5] Lund Univ, Malmo Univ Hosp, Dept Clin Sci Diabet & Endocrinol, Malmo, Sweden
[6] Harvard Univ, Sch Med, Dept Med, Boston, MA 02115 USA
[7] Univ Helsinki, Cent Hosp, Dept Med, Folkhalsan Inst Genet,Folkhalsan Res Ctr, Helsinki, Finland
[8] Univ Helsinki, Res Program Mol Med, Helsinki, Finland
[9] Skaraborg Inst, Skovde, Sweden
[10] Childrens Hosp, Div Genet, Boston, MA 02115 USA
[11] Childrens Hosp, Div Endocrinol, Boston, MA 02115 USA
[12] Gen Collaborat, Cambridge, MA USA
关键词
LARGE-SCALE ASSOCIATION; HAPLOTYPE STRUCTURE; E23K VARIANT; GENE REGION; RISK; CHANNEL; RECEPTOR; DISEASE; CONFIRM; MAP;
D O I
10.2337/db06-0381
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Recently, common noncoding variants in the TCF7L2 gene were strongly associated with increased risk of type 2 diabetes in samples from Iceland, Denmark, and the U.S. We genotyped 13 single nucleotide polymorphisms (SNPs) across TCF7L2 in 8,310 individuals in family-based and case-control designs from Scandinavia, Poland, and the U.S. We convincingly confirmed the previous association of TCF7L2 SNPs with the risk of type 2 diabetes (rs7903146T odds ratio 1.40 [95% CI 1.30-1.50], P = 6.74 x 10(-20)). In nondiabetic individuals, the risk genotypes were associated with a substantial reduction in the insulinogenic index derived from an oral glucose tolerance test (risk allele homozygotes have half the insulin response to glucose of noncarriers, P = 0.003) but not with increased insulin resistance. These results suggest that TCF7L2 variants may act through insulin secretion to increase the risk of type 2 diabetes.
引用
收藏
页码:2890 / 2895
页数:6
相关论文
共 26 条
[1]   A haplotype map of the human genome [J].
Altshuler, D ;
Brooks, LD ;
Chakravarti, A ;
Collins, FS ;
Daly, MJ ;
Donnelly, P ;
Gibbs, RA ;
Belmont, JW ;
Boudreau, A ;
Leal, SM ;
Hardenbol, P ;
Pasternak, S ;
Wheeler, DA ;
Willis, TD ;
Yu, FL ;
Yang, HM ;
Zeng, CQ ;
Gao, Y ;
Hu, HR ;
Hu, WT ;
Li, CH ;
Lin, W ;
Liu, SQ ;
Pan, H ;
Tang, XL ;
Wang, J ;
Wang, W ;
Yu, J ;
Zhang, B ;
Zhang, QR ;
Zhao, HB ;
Zhao, H ;
Zhou, J ;
Gabriel, SB ;
Barry, R ;
Blumenstiel, B ;
Camargo, A ;
Defelice, M ;
Faggart, M ;
Goyette, M ;
Gupta, S ;
Moore, J ;
Nguyen, H ;
Onofrio, RC ;
Parkin, M ;
Roy, J ;
Stahl, E ;
Winchester, E ;
Ziaugra, L ;
Shen, Y .
NATURE, 2005, 437 (7063) :1299-1320
[2]   The common PPARγ Pro12Ala polymorphism is associated with decreased risk of type 2 diabetes [J].
Altshuler, D ;
Hirschhorn, JN ;
Klannemark, M ;
Lindgren, CM ;
Vohl, MC ;
Nemesh, J ;
Lane, CR ;
Schaffner, SF ;
Bolk, S ;
Brewer, C ;
Tuomi, T ;
Gaudet, D ;
Hudson, TJ ;
Daly, M ;
Groop, L ;
Lander, ES .
NATURE GENETICS, 2000, 26 (01) :76-80
[3]   Genetic association mapping based on discordant sib pairs: The discordant-alleles test [J].
Boehnke, M ;
Langefeld, CD .
AMERICAN JOURNAL OF HUMAN GENETICS, 1998, 62 (04) :950-961
[4]   Prevention of type 2 diabetes -: Insulin resistance and β-cell function [J].
Chiasson, JL ;
Rabasa-Lhoret, M .
DIABETES, 2004, 53 :S34-S38
[5]   Efficiency and power in genetic association studies [J].
de Bakker, PIW ;
Yelensky, R ;
Pe'er, I ;
Gabriel, SB ;
Daly, MJ ;
Altshuler, D .
NATURE GENETICS, 2005, 37 (11) :1217-1223
[6]   Mechanisms of disease: Molecular mechanisms and clinical pathophysiology of maturity-onset diabetes of the young. [J].
Fajans, SS ;
Bell, GI ;
Polonsky, KS .
NEW ENGLAND JOURNAL OF MEDICINE, 2001, 345 (13) :971-980
[7]   Haplotype structure and genotype-phenotype correlations of the sulfonylurea receptor and the islet ATP-sensitive potassium channel gene region [J].
Florez, JC ;
Burtt, N ;
de Bakker, PIW ;
Almgren, P ;
Tuomi, T ;
Holmkvist, J ;
Gaudet, D ;
Hudson, TJ ;
Schaffner, SF ;
Daly, MJ ;
Hirschhorn, JN ;
Groop, L ;
Altshuler, D .
DIABETES, 2004, 53 (05) :1360-1368
[8]  
Florez JC, 2006, DIABETES, V55, P128, DOI 10.2337/diabetes.55.01.06.db05-0954
[9]   Association testing of the protein tyrosine phosphatase 1B gene (PTPN1) with type 2 diabetes in 7,883 people [J].
Florez, JC ;
Agapakis, CM ;
Burtt, NP ;
Sun, M ;
Almgren, P ;
Råstam, L ;
Tuomi, T ;
Gaudet, D ;
Hudson, TJ ;
Daly, MJ ;
Ardlie, KG ;
Hirschhorn, JN ;
Groop, L ;
Altshuler, B .
DIABETES, 2005, 54 (06) :1884-1891
[10]   Association testing in 9,000 people fails to confirm the association of the insulin receptor substrate-1 G972R polymorphism with type 2 diabetes [J].
Florez, JC ;
Sjögren, M ;
Burtt, N ;
Orho-Melander, M ;
Schayer, S ;
Sun, M ;
Almgren, P ;
Lindblad, U ;
Tuomi, T ;
Gaudet, D ;
Hudson, TJ ;
Daly, MJ ;
Ardlie, KG ;
Hirschhorn, JN ;
Altshuler, D ;
Groop, L .
DIABETES, 2004, 53 (12) :3313-3318