Increased in vivo transcription of an IL-8 haplotype associated with respiratory syncytial virus disease-susceptibility

被引:124
作者
Hacking, D
Knight, JC
Rockett, K
Brown, H
Frampton, J
Kwiatkowski, DP
Hull, J
Udalova, IA
机构
[1] Univ Oxford, Wellcome Trust Ctr Human Genet, Childhood Infect Grp, Oxford OX3 7BN, England
[2] Univ Oxford, Dept Pediat, Oxford OX3 7BN, England
[3] Univ Birmingham, Sch Med, Dept Anat, Birmingham, W Midlands, England
基金
英国医学研究理事会;
关键词
allele-specific expression; human; lung; chemokines;
D O I
10.1038/sj.gene.6364067
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Interleukin-8 (IL-8) has been implicated in the pathogenesis of RSV-induced bronchiolitis. Previously, we have described an association between bronchiolitis disease severity and a specific IL-8 haplotype comprising six single-nucleotide polymorphisms (SNPs) (-251A/+396G/+781T/+1238delA/+1633T/+2767T, haplotype 2). Here we investigated the functional basis for this association by measuring haplotype-specific transcription in vivo in human primary cells. We found a significant increase in transcript level derived from the IL-8 haplotype 2 relative to the mirror haplotype 1 (-251T/+396T/ +781C/+1238insA/+1633C/+2767A) in respiratory epithelial cells but not in lymphocytes. A promoter polymorphism, -251A, present on the high producer haplotype, had no significant affect on the allele-specific level of transcription when analyzed in reporter gene experiments in human respiratory epithelial A549 cells. We proceeded to systematically screen for allele-specific protein-DNA binding in this functional haplotype, which revealed significant differential binding at the +781T/C polymorphism. C/EBP beta was identified as being part of a transcription factor binding complex that preferentially bound in the presence of the +781 T allele. These results suggest that the mechanism for disease susceptibility to RSV-induced bronchiolitis may occur through a haplotype-specific increase in IL-8 transcription, which may be mediated by functional polymorphisms within that haplotype.
引用
收藏
页码:274 / 282
页数:9
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