Toward an atomic model of the 26S proteasome

被引:21
作者
Cheng, Yifan [1 ]
机构
[1] Univ Calif San Francisco, WM Keck Adv Microscopy Lab, Dept Biochem & Biophys, San Francisco, CA 94158 USA
关键词
20S PROTEASOME; CRYSTAL-STRUCTURE; CRYOELECTRON MICROSCOPY; ELECTRON-MICROSCOPY; COMPLEX; UBIQUITIN; YEAST; MECHANISM; PARTICLE; BINDING;
D O I
10.1016/j.sbi.2009.02.004
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Since the discovery of the 26S proteasome, much progress has been made in determining the structure of this large dynamic protein complex. Until now, a vast amount of structural information of the proteasome has been obtained from all kinds of structure determination techniques, and the function of the protease core is well understood at atomic detail. Yet our understanding of the entire 26S proteasome structure, particularly its 19S regulatory complex, is still limited at a low-resolution blob-ology level. In this review, we highlight the recent progress made in understanding the mechanism of 20S gate opening by the proteasomal activators. We also emphasized the recent methodological advances, particularly in achieving the near atomic resolution by single particle electron cryomicroscopy, and the possible approaches that will enable more detailed structural analysis of the entire 26S proteasome.
引用
收藏
页码:203 / 208
页数:6
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共 50 条
[1]   The molecular architecture of the nuclear pore complex [J].
Alber, Frank ;
Dokudovskaya, Svetlana ;
Veenhoff, Liesbeth M. ;
Zhang, Wenzhu ;
Kipper, Julia ;
Devos, Damien ;
Suprapto, Adisetyantari ;
Karni-Schmidt, Orit ;
Williams, Rosemary ;
Chait, Brian T. ;
Sali, Andrej ;
Rout, Michael P. .
NATURE, 2007, 450 (7170) :695-701
[2]   Determining the architectures of macromolecular assemblies [J].
Alber, Frank ;
Dokudovskaya, Svetlana ;
Veenhoff, Liesbeth M. ;
Zhang, Wenzhu ;
Kipper, Julia ;
Devos, Damien ;
Suprapto, Adisetyantari ;
Karni-Schmidt, Orit ;
Williams, Rosemary ;
Chait, Brian T. ;
Rout, Michael P. ;
Sali, Andrej .
NATURE, 2007, 450 (7170) :683-694
[3]   The proteasome:: Paradigm of a self-compartmentalizing protease [J].
Baumeister, W ;
Walz, J ;
Zühl, F ;
Seemuller, E .
CELL, 1998, 92 (03) :367-380
[4]   A peptide deformylase-ribosome complex reveals mechanism of nascent chain processing [J].
Bingel-Erlenmeyer, Rouven ;
Kohler, Rebecca ;
Kramer, Guenter ;
Sandikci, Arzu ;
Antolic, Snjezana ;
Maier, Timm ;
Schaffitzel, Christiane ;
Wiedmann, Brigitte ;
Bukau, Bernd ;
Ban, Nenad .
NATURE, 2008, 452 (7183) :108-U13
[5]   Structure of the mammalian 80S ribosome at 8.7 Å resolution [J].
Chandramouli, Preethi ;
Topf, Maya ;
Menetret, Jean-Francois ;
Eswar, Narayanan ;
Cannone, Jamie J. ;
Gutell, Robin R. ;
Sali, Andrej ;
Akey, Christopher W. .
STRUCTURE, 2008, 16 (04) :535-548
[6]   Chaperonin complex with a newly folded protein encapsulated in the folding chamber [J].
Clare, D. K. ;
Bakkes, P. J. ;
van Heerikhuizen, H. ;
van der Vies, S. M. ;
Saibil, H. R. .
NATURE, 2009, 457 (7225) :107-U113
[7]  
DUBIEL W, 1992, J BIOL CHEM, V267, P22369
[8]   Detection and separation of heterogeneity in molecular complexes by statistical analysis of their two-dimensional projections [J].
Elad, Nadav ;
Clare, Daniel K. ;
Salbil, Helen R. ;
Orlova, Elena V. .
JOURNAL OF STRUCTURAL BIOLOGY, 2008, 162 (01) :108-120
[9]   Topologies of a substrate protein bound to the chaperonin GroEL [J].
Elad, Nadav ;
Farr, George W. ;
Clare, Daniel K. ;
Orlova, Elena V. ;
Horwich, Arthur L. ;
Saibil, Helen R. .
MOLECULAR CELL, 2007, 26 (03) :415-426
[10]   The pore of activated 20S proteasomes has an ordered 7-fold symmetric conformation [J].
Förster, A ;
Whitby, FG ;
Hill, CP .
EMBO JOURNAL, 2003, 22 (17) :4356-4364