Comparative sequence analysis of the 5' noncoding region of classical swine fever virus strains from Europe, Asia, and America

被引:30
作者
Stadejek, T
Warg, J
Ridpath, JF
机构
[1] USDA,APHIS,VS,NVSL,DIAGNOST VIROL LAB,AMES,IA 50010
[2] USDA ARS,ENTER DIS RES,NATL ANIM DIS CTR,AMES,IA
关键词
D O I
10.1007/BF01718335
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Polymerase chain reaction was utilized to determine the sequence of a 280 base pair fragment from cDNAs of the 5' noncoding region of 29 isolates of classical swine fever virus. Phylogenetic analysis of the sequences revealed low level genomic variation that correlated with the geographic origins of the isolates.
引用
收藏
页码:771 / 777
页数:7
相关论文
共 15 条
  • [1] BOLIN SR, 1994, J AM VET MED ASSOC, V205, P742
  • [2] SPECIFIC SEQUENCE AMPLIFICATION OF BOVINE VIRUS DIARRHEA VIRUS (BVDV) AND HOG-CHOLERA VIRUS AND SEQUENCING OF BVDV NUCLEIC-ACID
    BOYE, M
    KAMSTRUP, S
    DALSGAARD, K
    [J]. VETERINARY MICROBIOLOGY, 1991, 29 (01) : 1 - 13
  • [3] MOLECULAR-CLONING AND NUCLEOTIDE-SEQUENCE OF THE PESTIVIRUS BOVINE VIRAL DIARRHEA VIRUS
    COLLETT, MS
    LARSON, R
    GOLD, C
    STRICK, D
    ANDERSON, DK
    PURCHIO, AF
    [J]. VIROLOGY, 1988, 165 (01) : 191 - 199
  • [4] DEMOERLOOZE L, 1993, J GEN VIROL, V74, P1433, DOI 10.1099/0022-1317-74-7-1433
  • [5] MOLECULAR-CLONING AND NUCLEOTIDE-SEQUENCE OF A PESTIVIRUS GENOME, NONCYTOPATHIC BOVINE VIRAL DIARRHEA VIRUS STRAIN-SD-1
    DENG, RT
    BROCK, KV
    [J]. VIROLOGY, 1992, 191 (02) : 867 - 879
  • [6] EDWARDS S, 1990, DEUT TIERARZTL WOCH, V97, P79
  • [7] RAPID CHARACTERIZATION OF NEW PESTIVIRUS STRAINS BY DIRECT SEQUENCING OF PCR-AMPLIFIED CDNA FROM THE 5' NONCODING REGION
    HOFMANN, MA
    BRECHTBUHL, K
    STAUBER, N
    [J]. ARCHIVES OF VIROLOGY, 1994, 139 (1-2) : 217 - 229
  • [8] CLASSICAL SWINE FEVER - GENETIC DETECTION AND ANALYSIS OF DIFFERENCES BETWEEN VIRUS ISOLATES
    LOWINGS, JP
    PATON, DJ
    SANDS, JJ
    DEMIA, GM
    RUTILI, D
    [J]. JOURNAL OF GENERAL VIROLOGY, 1994, 75 : 3461 - 3468
  • [9] MOLECULAR-CLONING AND NUCLEOTIDE-SEQUENCE OF THE GENOME OF HOG-CHOLERA VIRUS
    MEYERS, G
    RUMENAPF, T
    THIEL, HJ
    [J]. VIROLOGY, 1989, 171 (02) : 555 - 567
  • [10] MOLECULAR-CLONING AND NUCLEOTIDE-SEQUENCE OF HOG-CHOLERA VIRUS-STRAIN BRESCIA AND MAPPING OF THE GENOMIC REGION ENCODING ENVELOPE PROTEIN-E1
    MOORMANN, RJM
    WARMERDAM, PAM
    VANDERMEER, B
    SCHAAPER, WMM
    WENSVOORT, G
    HULST, MM
    [J]. VIROLOGY, 1990, 177 (01) : 184 - 198