Usher syndrome type III:: Revised genomic structure of the USH3 gene and identification of novel mutations

被引:68
作者
Fields, RR
Zhou, GM
Huang, DL
Davis, JR
Möller, C
Jacobson, SG
Kimberling, WJ
Sumegi, J
机构
[1] Univ Nebraska, Ctr Study Treatment Usher Syndrome, Boys Town Natl Res Hosp, Med Ctr, Omaha, NE 68131 USA
[2] Univ Nebraska, Ctr Human Mol Genet, Med Ctr, Omaha, NE 68131 USA
[3] Univ Nebraska, Dept Pathol & Microbiol, Med Ctr, Omaha, NE 68131 USA
[4] Sahlgrenska Univ Hosp, Dept Audiol, Gothenburg, Sweden
[5] Univ Penn, Scheie Eye Inst, Dept Ophthalmol, Philadelphia, PA 19104 USA
关键词
D O I
10.1086/342098
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Usher syndrome type III is an autosomal recessive disorder characterized by progressive sensorineural hearing loss, vestibular dysfunction, and retinitis pigmentosa. The disease gene was localized to 3q25 and recently was identified by positional cloning. In the present study, we have revised the structure of the USH3 gene, including a new translation start site, 5 untranslated region, and a transcript encoding a 232-amino acid protein. The mature form of the protein is predicted to contain three transmembrane domains and 204 residues. We have found four new disease-causing mutations, including one that appears to be relatively common in the Ashkenazi Jewish population. We have also identified mouse (chromosome 3) and rat (chromosome 2) orthologues, as well as two human paralogues on chromosomes 4 and 10.
引用
收藏
页码:607 / 617
页数:11
相关论文
共 8 条
  • [1] Genetic heterogeneity of Usher syndrome: Analysis of 151 families with Usher type I
    Astuto, LM
    Weston, MD
    Carney, CA
    Hoover, DM
    Cremers, CWRJ
    Wagenaar, M
    Moller, C
    Smith, RJH
    Pieke-Dahl, S
    Greenberg, J
    Ramesar, R
    Jacobson, SG
    Ayuso, C
    Heckenlively, JR
    Tamayo, M
    Gorin, MB
    Reardon, W
    Kimerling, WJ
    [J]. AMERICAN JOURNAL OF HUMAN GENETICS, 2000, 67 (06) : 1569 - 1574
  • [2] MULTIPLE SEQUENCE ALIGNMENT WITH HIERARCHICAL-CLUSTERING
    CORPET, F
    [J]. NUCLEIC ACIDS RESEARCH, 1988, 16 (22) : 10881 - 10890
  • [3] Refined mapping of the usher syndrome type III locus on chromosome 3, exclusion of candidate genes, and identification of the putative mouse homologous region
    Joensuu, T
    Blanco, G
    Pakarinen, L
    Sistonen, P
    Kaariainen, H
    Brown, S
    DeLaChapelle, A
    Sankila, EM
    [J]. GENOMICS, 1996, 38 (03) : 255 - 263
  • [4] A sequence-ready map of the Usher syndrome type III critical region on chromosome 3q
    Joensuu, T
    Hämäläinen, R
    Lehesjoki, AE
    de la Chapelle, A
    Sankila, EM
    [J]. GENOMICS, 2000, 63 (03) : 409 - 416
  • [5] Mutations in a novel gene with transmembrane domains underlie Usher syndrome type 3
    Joensuu, T
    Hämäläinen, R
    Yuan, B
    Johnson, C
    Tegelberg, S
    Gasparini, P
    Zelante, L
    Pirvola, U
    Pakarinen, L
    Lehesjoki, AE
    de la Chapelle, A
    Sankila, EM
    [J]. AMERICAN JOURNAL OF HUMAN GENETICS, 2001, 69 (04) : 673 - 684
  • [6] Kimberling WJ, 2000, ADV OTO-RHINO-LARYNG, V56, P11
  • [7] Mutations in the myosin VIIA gene cause a wide phenotypic spectrum, including atypical Usher syndrome
    Liu, XZ
    Hope, C
    Walsh, J
    Newton, V
    Ke, XM
    Liang, CY
    Xu, LR
    Zhou, JM
    Trump, D
    Steel, KP
    Bundey, S
    Brown, SDM
    [J]. AMERICAN JOURNAL OF HUMAN GENETICS, 1998, 63 (03) : 909 - 912
  • [8] Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites
    Nielsen, H
    Engelbrecht, J
    Brunak, S
    vonHeijne, G
    [J]. PROTEIN ENGINEERING, 1997, 10 (01): : 1 - 6