Widefield deconvolution epifluorescence microscopy combined with fluorescence in situ hybridization reveals the spatial arrangement of bacteria in sponge tissue

被引:70
作者
Manz, W
Arp, G
Schumann-Kindel, G
Szewzyk, U
Reitner, J
机构
[1] Tech Univ Berlin, Inst Techn Umweltschutz, Fachgebiet Okol Mikroorganismen, D-10587 Berlin, Germany
[2] Univ Gottingen, Inst Geol & Palaontol, D-37077 Gottingen, Germany
[3] Univ Gottingen, Museum Geol & Palaontol, D-37077 Gottingen, Germany
关键词
widefield deconvolution epifluorescence microscopy; FISH; 16S rRNA oligonucleotide probes; Sponge associated bacteria; Chondrosia reniformis;
D O I
10.1016/S0167-7012(99)00103-7
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Widefield deconvolution epifluorescence microscopy (WDEM) combined with fluorescence in situ hybridization (FISH) was performed to identify and characterize single bacterial cells within sections of the mediterranean sponge Chondrosia reniformis. Sponges were embedded in paraffin wax or plastic prior to the preparation of thin sections, in situ hybridization and microscopy. Serial digital images generated by widefield epifluorescence microscopy were visualized using an exhaustive photon reassignment deconvolution algorithm and three-dimensional rendering software. Computer processing of series of images taken at different focal planes with the deconvolution technique provided deblurred three-dimensional images with high optical resolution on a submicron scale. Results from the deconvolution enhanced widefield microscopy were compared with conventional epifluorescent microscopical images. By the application of the deconvolution algorithm on digital image data obtained with widefield epifluorescence microscopy after FISH, the occurrence and spatial arrangement of Desulfovibrionaceae closely associated with micropores of Chondrosia reniformis could be visualized. (C) 2000 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:125 / 134
页数:10
相关论文
共 20 条
[1]   FLUORESCENT-OLIGONUCLEOTIDE PROBING OF WHOLE CELLS FOR DETERMINATIVE, PHYLOGENETIC, AND ENVIRONMENTAL-STUDIES IN MICROBIOLOGY [J].
AMANN, RI ;
KRUMHOLZ, L ;
STAHL, DA .
JOURNAL OF BACTERIOLOGY, 1990, 172 (02) :762-770
[2]   PHYLOGENETIC IDENTIFICATION AND IN-SITU DETECTION OF INDIVIDUAL MICROBIAL-CELLS WITHOUT CULTIVATION [J].
AMANN, RI ;
LUDWIG, W ;
SCHLEIFER, KH .
MICROBIOLOGICAL REVIEWS, 1995, 59 (01) :143-169
[3]  
CARRINGTON WA, 1995, HDB BIOL CONFOCAL MI, P151
[4]   A NEW, LESS TOXIC POLYMERIZATION SYSTEM FOR THE EMBEDDING OF SOFT-TISSUES IN GLYCOL METHACRYLATE AND SUBSEQUENT PREPARING OF SERIAL SECTIONS [J].
GERRITS, PO ;
SMID, L .
JOURNAL OF MICROSCOPY-OXFORD, 1983, 132 (OCT) :81-85
[5]  
Haugland R.P., 1996, Handbook of Fluorescent Probes and Research Chemicals
[6]  
Holmes Timothy J., 1995, P389
[7]  
LARENCE JR, 1996, MANUAL ENV MICROBIOL, P29
[8]   Role of lipopolysaccharide in colonization of the mouse intestine by Salmonella typhimurium studied by in situ hybridization [J].
Licht, TR ;
Krogfelt, KA ;
Cohen, PS ;
Poulsen, LK ;
Urbance, J ;
Molin, S .
INFECTION AND IMMUNITY, 1996, 64 (09) :3811-3817
[9]   Physical stabilization and confocal microscopy of bacteria on roots using 16S rRNA targeted, fluorescent-labeled oligonucleotide probes [J].
Macnaughton, SJ ;
Booth, T ;
Embley, TM ;
ODonnell, AG .
JOURNAL OF MICROBIOLOGICAL METHODS, 1996, 26 (03) :279-285
[10]   IN-SITU IDENTIFICATION OF LEGIONELLACEAE USING 16S RIBOSOMAL-RNA-TARGETED OLIGONUCLEOTIDE PROBES AND CONFOCAL LASER-SCANNING MICROSCOPY [J].
MANZ, W ;
AMANN, R ;
SZEWZYK, R ;
SZEWZYK, U ;
STENSTROM, TA ;
HUTZLER, P ;
SCHLEIFER, KH .
MICROBIOLOGY-SGM, 1995, 141 :29-39