proximity ligation assay;
padlock probes;
SNP genotyping;
interaction analysis;
in situ protein analysis;
ROLLING-CIRCLE AMPLIFICATION;
IN-SITU DETECTION;
SINGLE-MOLECULE DETECTION;
NUCLEIC-ACID SEQUENCES;
LIGASE CHAIN-REACTION;
PADLOCK PROBES;
PROXIMITY LIGATION;
POINT MUTATIONS;
MULTIPLEX AMPLIFICATION;
OLIGONUCLEOTIDE LIGATION;
D O I:
10.1146/annurev-anchem-060908-155239
中图分类号:
O65 [分析化学];
学科分类号:
070302 ;
081704 ;
摘要:
Analytical reactions in which short DNA strands are used in combination with DNA ligases have proven useful for measuring, decoding, and locating most classes of macromolecules. Given the need to accumulate large amounts of precise molecular information from biological systems in research and ill diagnostics, ligation reactions will continue to offer valuable strategies for advanced analytical reactions. Here, we provide a basis for further development of methods by reviewing the history of analytical ligation reactions, discussing the properties of ligation reactions that render them suitable for engineering novel assays, describing a wide range of successful ligase-based assays, and briefly considering future directions.
机构:
Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA
Royal Inst Technol, Dept Biotechnol, Stockholm, SwedenStanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA
机构:
Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USAStanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA
Thiyagarajan, Sreedevi
;
Nyren, Pal
论文数: 0引用数: 0
h-index: 0
机构:
Royal Inst Technol, Dept Biotechnol, Stockholm, SwedenStanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA
Nyren, Pal
;
Davis, Ronald W.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USAStanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA
Davis, Ronald W.
;
Fire, Andrew Z.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Pathol, Sch Med, Stanford, CA 94305 USA
Stanford Univ, Dept Genet, Sch Med, Stanford, CA 94305 USAStanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA
Fire, Andrew Z.
;
Pourmand, Nader
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA
Univ Calif Santa Cruz, Santa Cruz, CA 95064 USAStanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA
机构:
Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA
Royal Inst Technol, Dept Biotechnol, Stockholm, SwedenStanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA
机构:
Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USAStanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA
Thiyagarajan, Sreedevi
;
Nyren, Pal
论文数: 0引用数: 0
h-index: 0
机构:
Royal Inst Technol, Dept Biotechnol, Stockholm, SwedenStanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA
Nyren, Pal
;
Davis, Ronald W.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USAStanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA
Davis, Ronald W.
;
Fire, Andrew Z.
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Dept Pathol, Sch Med, Stanford, CA 94305 USA
Stanford Univ, Dept Genet, Sch Med, Stanford, CA 94305 USAStanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA
Fire, Andrew Z.
;
Pourmand, Nader
论文数: 0引用数: 0
h-index: 0
机构:
Stanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA
Univ Calif Santa Cruz, Santa Cruz, CA 95064 USAStanford Univ, Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA