Obtaining thermochemical data by the extended kinetic method

被引:46
作者
Bouchoux, G [1 ]
Sablier, M
Berruyer-Penaud, F
机构
[1] Ecole Polytech, CNRS, UMR 7651, Lab Mecan Reactionnels, F-91128 Palaiseau, France
[2] Univ Paris 11, CNRS, UMR 8000, Grp Chim Theor,Lab Chim Phys, F-91405 Orsay, France
来源
JOURNAL OF MASS SPECTROMETRY | 2004年 / 39卷 / 09期
关键词
extended kinetic method; proton affinity; protonation entropy; isothermal point;
D O I
10.1002/jms.680
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
A microcanonical analysis of the extended kinetic method is performed using statistical rate calculations based on orbiting transition state theory. The model systems simulate polydentate bases M which exhibit losses of entropy upon protonation of up to 35 kJ mol(-1) K-1. It is shown that the correlations using the natural logarithm of the ratio of rate constants vs the proton affinity of the reference bases, at several effective temperatures, lead to correct proton affinity and protonation entropy of the base M of interest. A systematic underestimate of the latter quantity (by 5-15%), mainly due to the use of a linear rather than a polynomial curve fitting procedure, is noted, however. When considering experimental data, more severe underestimates are observed for the protonation entropies of polydentate bases (by 50-90%). The origins of these considerable discrepancies are beyond the limits of the present modeling and remain to be determined. Copyright (C) 2004 John Wiley Sons, Ltd.
引用
收藏
页码:986 / 997
页数:12
相关论文
共 45 条
[1]   Entropy measurements and the kinetic method: A statistically meaningful approach [J].
Armentrout, PB .
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 2000, 11 (05) :371-379
[2]   ON THE PROTON AFFINITY OF SOME ALPHA-AMINO-ACIDS AND THE THEORY OF THE KINETIC METHOD [J].
BOJESEN, G ;
BREINDAHL, T .
JOURNAL OF THE CHEMICAL SOCIETY-PERKIN TRANSACTIONS 2, 1994, (05) :1029-1037
[3]   Application of the kinetic method to bifunctional bases ESI tandem quadrupole experiments [J].
Bouchoux, G ;
Buisson, DA ;
Bourcier, S ;
Sablier, M .
INTERNATIONAL JOURNAL OF MASS SPECTROMETRY, 2003, 228 (2-3) :1035-1054
[4]   Thermochemistry and unimolecular reactivity of protonated α,ω-aminoalcohols in the gas phase [J].
Bouchoux, G ;
Choret, N ;
Berruyer-Penaud, F ;
Flammang, R .
INTERNATIONAL JOURNAL OF MASS SPECTROMETRY, 2002, 217 (1-3) :195-230
[5]  
BOUVHOUX G, 2003, INT J MASS SPECTROM, V227, P479
[6]   The proton affinities of amin-alkanes. A test case for the kinetic method [J].
Cao, J ;
Holmes, JL .
INTERNATIONAL JOURNAL OF MASS SPECTROMETRY, 2000, 195 :525-532
[7]   Determining the proton affinities of nitriles by the kinetic method [J].
Cao, J ;
Holmes, JL .
EUROPEAN MASS SPECTROMETRY, 1999, 5 (01) :19-22
[8]   Proton affinities of simple amines; entropies and enthalpies of activation and their effect on the kinetic method for evaluating proton affinities [J].
Cao, J ;
Aubry, C ;
Holmes, JL .
JOURNAL OF PHYSICAL CHEMISTRY A, 2000, 104 (44) :10045-10052
[9]   Li+, Na+, and K+ binding to the DNA and RNA nucleobases. Bond energies and attachment sites from the dissociation of metal ion-bound heterodimers [J].
Cerda, BA ;
Wesdemiotis, C .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1996, 118 (47) :11884-11892
[10]   Na+ binding to cyclic and linear dipeptides.: Bond energies, entropies of Na+ complexation, and attachment sites from the dissociation of Na+-bound heterodimers and ab initio calculations [J].
Cerda, BA ;
Hoyau, S ;
Ohanessian, G ;
Wesdemiotis, C .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1998, 120 (10) :2437-2448