Natural selection on gene expression

被引:160
作者
Gilad, Yoav [1 ]
Oshlack, Alicia
Rifkin, Scott A.
机构
[1] Univ Chicago, Dept Human Genet, Chicago, IL 60637 USA
[2] Walter & Eliza Hall Inst Med Res, Parkville, Vic 3050, Australia
[3] Harvard Univ, Dept Organism & Evolutionary Biol, Cambridge, MA 02138 USA
关键词
D O I
10.1016/j.tig.2006.06.002
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Changes in genetic regulation contribute to adaptations in natural populations and influence susceptibility to human diseases. Despite their potential phenotypic importance, the selective pressures acting on regulatory processes in general and gene expression levels in particular are largely unknown. Studies in model organisms suggest that the expression levels of most genes evolve under stabilizing selection, although a few are consistent with adaptive evolution. However, it has been proposed that gene expression levels in primates evolve largely in the absence of selective constraints. In this article, we discuss the microarray-based observations that led to these disparate interpretations. We conclude that in both primates and model organisms, stabilizing selection is likely to be the dominant mode of gene expression evolution. An important implication is that mutations affecting gene expression will often be deleterious and might underlie many human diseases.
引用
收藏
页码:456 / 461
页数:6
相关论文
共 50 条
[1]  
Akashi H, 1999, GENETICS, V151, P221
[2]   A comparison of normalization methods for high density oligonucleotide array data based on variance and bias [J].
Bolstad, BM ;
Irizarry, RA ;
Åstrand, M ;
Speed, TP .
BIOINFORMATICS, 2003, 19 (02) :185-193
[3]   Discovering genotypes underlying human phenotypes: past successes for mendelian disease, future approaches for complex disease [J].
Botstein, D ;
Risch, N .
NATURE GENETICS, 2003, 33 (Suppl 3) :228-237
[4]   Natural selection on protein-coding genes in the human genome [J].
Bustamante, CD ;
Fledel-Alon, A ;
Williamson, S ;
Nielsen, R ;
Hubisz, MT ;
Glanowski, S ;
Tanenbaum, DM ;
White, TJ ;
Sninsky, JJ ;
Hernandez, RD ;
Civello, D ;
Adams, MD ;
Cargill, M ;
Clark, AG .
NATURE, 2005, 437 (7062) :1153-1157
[5]   Elevated gene expression levels distinguish human from non-human primate brains [J].
Cáceres, M ;
Lachuer, J ;
Zapala, MA ;
Redmond, JC ;
Kudo, L ;
Geschwind, DH ;
Lockhart, DJ ;
Preuss, TM ;
Barlow, C .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (22) :13030-13035
[6]   Genetics and the making of Homo sapiens [J].
Carroll, SB .
NATURE, 2003, 422 (6934) :849-857
[7]   GENETIC DIFFERENTIATION OF QUANTITATIVE CHARACTERS BETWEEN POPULATIONS OR SPECIES .1. MUTATION AND RANDOM GENETIC DRIFT [J].
CHAKRABORTY, R ;
NEI, M .
GENETICAL RESEARCH, 1982, 39 (03) :303-314
[8]   The transcriptional consequences of mutation and natural selection in Caenorhabditis elegans [J].
Denver, DR ;
Morris, K ;
Streelman, JT ;
Kim, SK ;
Lynch, M ;
Thomas, WK .
NATURE GENETICS, 2005, 37 (05) :544-548
[9]   ON THE ARCHITECTURE OF REGULATORY SYSTEMS - EVOLUTIONARY INSIGHTS AND IMPLICATIONS [J].
DICKINSON, WJ .
BIOESSAYS, 1988, 8 (06) :204-208
[10]   Intra- and interspecific variation in primate gene expression patterns [J].
Enard, W ;
Khaitovich, P ;
Klose, J ;
Zöllner, S ;
Heissig, F ;
Giavalisco, P ;
Nieselt-Struwe, K ;
Muchmore, E ;
Varki, A ;
Ravid, R ;
Doxiadis, GM ;
Bontrop, RE ;
Pääbo, S .
SCIENCE, 2002, 296 (5566) :340-343