CONVERT: A user-friendly program to reformat diploid genotypic data for commonly used population genetic software packages

被引:500
作者
Glaubitz, JC [1 ]
机构
[1] Purdue Univ, Dept Forestry & Nat Resources, Hardwood Tree Improvement & Regenerat Ctr, W Lafayette, IN 47907 USA
来源
MOLECULAR ECOLOGY NOTES | 2004年 / 4卷 / 02期
关键词
data analysis software; input format conversion; population genetics;
D O I
10.1111/j.1471-8286.2004.00597.x
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
CONVERT is a user-friendly, 32-bit Windows program that facilitates ready transfer of codominant, diploid genotypic data amongst commonly used population genetic software packages. CONVERT reads input files in its own 'standard' data format, easily produced from an EXCEL file of diploid, codominant marker data, and can convert these to the input formats of the following programs: GDA, GENEPOP, ARLEQUIN, POPGENE, MICROSAT, PHYLIP. and STRUCTURE. CONVERT can also read input files in GENEPOP format. In addition, CONVERT can produce a summary table of allele frequencies in which private alleles and the sample sizes at each locus are indicated.
引用
收藏
页码:309 / 310
页数:2
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