Self modeling with flexible, random time transformations

被引:32
作者
Brumback, LC
Lindstrom, MJ
机构
[1] Univ Washington, Dept Biostat, Seattle, WA 98195 USA
[2] Univ Wisconsin, Dept Biostat & Med Informat, Madison, WI 53792 USA
关键词
functional data; nonlinear mixed effects model; self modeling; time warping;
D O I
10.1111/j.0006-341X.2004.00191.x
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Methods for modeling sets of complex curves where the curves must be aligned in time (or in another continuous predictor) fall into the general class of functional data analysis and include self-modeling regression and time-warping procedures. Self-modeling regression (SEMOR), also known as a shape invariant model (SIM), assumes the curves have a common shape, modeled nonparametrically, and curve-specific differences in amplitude and timing, traditionally modeled by linear transformations. When curves contain multiple features that need to be aligned in time, SEMOR may be inadequate since a linear time transformation generally cannot align more than one feature. Time warping procedures focus on timing variability and on finding flexible time warps to align multiple data features. We draw on these methods to develop a SIM that models the time transformations as random, flexible, monotone functions. The model is motivated by speech movement data from the University of Wisconsin X-ray microbeam speech production project and is applied to these data to test the effect of different speaking conditions on the shape and relative timing of movement profiles.
引用
收藏
页码:461 / 470
页数:10
相关论文
共 28 条
[1]   Aligning gene expression time series with time warping algorithms [J].
Aach, J ;
Church, GM .
BIOINFORMATICS, 2001, 17 (06) :495-508
[2]   SPEAKING RATE AND SPEECH MOVEMENT VELOCITY PROFILES [J].
ADAMS, SG ;
WEISMER, G ;
KENT, RD .
JOURNAL OF SPEECH AND HEARING RESEARCH, 1993, 36 (01) :41-54
[3]  
Anderson T.W., 1986, STAT ANAL DATA, V2nd
[4]  
de Boor C., 1978, PRACTICAL GUIDE SPLI, DOI DOI 10.1007/978-1-4612-6333-3
[5]  
Hastie T.J., 1992, MODEL SIGNATURE VERI
[6]   APPROXIMATION TO DATA BY SPLINES WITH FREE KNOTS [J].
JUPP, DLB .
SIAM JOURNAL ON NUMERICAL ANALYSIS, 1978, 15 (02) :328-343
[7]   Semiparametric nonlinear mixed-effects models and their applications - Rejoinder [J].
Ke, CL ;
Wang, YD .
JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 2001, 96 (456) :1294-1298
[8]   Speech motor stability in IPD: Effects of rate and loudness manipulations [J].
Kleinow, J ;
Smith, A ;
Ramig, LO .
JOURNAL OF SPEECH LANGUAGE AND HEARING RESEARCH, 2001, 44 (05) :1041-1051
[9]   CONVERGENCE AND CONSISTENCY RESULTS FOR SELF-MODELING NONLINEAR-REGRESSION [J].
KNEIP, A ;
GASSER, T .
ANNALS OF STATISTICS, 1988, 16 (01) :82-112
[10]   Curve registration by local regression [J].
Kneip, A ;
Li, X ;
MacGibbon, KB ;
Ramsay, JO .
CANADIAN JOURNAL OF STATISTICS-REVUE CANADIENNE DE STATISTIQUE, 2000, 28 (01) :19-29