The diploid genome sequence of Candida albicans

被引:562
作者
Jones, T
Federspiel, NA
Chibana, H
Dungan, J
Kalman, S
Magee, BB
Newport, G
Thorstenson, YR
Agabian, N
Magee, PT
Davis, RW [1 ]
Scherer, S
机构
[1] Stanford Genome Technol Ctr, Palo Alto, CA 94304 USA
[2] Chiba Univ, Pathogen Fungi & Microbial Toxicoses Res Ctr, Chiba 2608673, Japan
[3] Univ Calif San Francisco, Dept Stomatol, San Francisco, CA 94143 USA
[4] Univ Calif San Francisco, Dept Microbiol & Immunol, San Francisco, CA 94143 USA
[5] Univ Calif San Francisco, Dept Pharmaceut Chem, San Francisco, CA 94143 USA
[6] Univ Minnesota, Dept Genet Cell Biol & Dev, Minneapolis, MN 55455 USA
关键词
D O I
10.1073/pnas.0401648101
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
We present the diploid genome sequence of the fungal pathogen Candida albicans. Because C albicans has no known haploid or homozygous form, sequencing was performed as a whole-genome shotgun of the heterozygous diploid genome in strain SC5314, a clinical isolate that is the parent of strains widely used for molecular analysis. We developed computational methods to assemble a diploid genome sequence in good agreement with available physical mapping data. We provide a whole-genome description of heterozygosity in the organism. Comparative genomic analyses provide important clues about the evolution of the species and its mechanisms of pathogenesis.
引用
收藏
页码:7329 / 7334
页数:6
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