The ATP-Mg2+ binding site and cytoplasmic domain interactions of Na+,K+-ATPase investigated with Fe2+-catalyzed oxidative cleavage and molecular modeling

被引:22
作者
Patchornik, G
Munson, K
Goldshleger, R
Shainskaya, A
Sachs, G
Karlish, SJD [1 ]
机构
[1] Weizmann Inst Sci, Dept Biol Chem, IL-76100 Rehovot, Israel
[2] Weizmann Inst Sci, Biol Mass Spectrometry Facil, IL-76100 Rehovot, Israel
[3] Univ Calif Los Angeles, Dept Physiol, Membrane Biol Lab, Los Angeles, CA 90073 USA
[4] VA Greater Los Angeles Healthcare Syst, Los Angeles, CA 90073 USA
关键词
D O I
10.1021/bi026334d
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
This work utilizes Fe2+-catalyzed cleavages and molecular modeling to obtain insight into conformations of cytoplasmic domains and ATP-Mg2+ binding sites of Na+,K+-ATPasc. In E-1 conformations the ATP-Fe2+ Complex mediates specific cleavages at 712VNDS (P domain) and near 440VAGDA (N domain). In E-2(K), ATP-Fe2+ mediates cleavages near 212TGES (A domain), near 440VAGDA, and between residues 460-490 (N domain). Cleavages at high ATP-Fe2+ concentrations do not support suggestions for two ATP sites. A new reagent, fluorescein-DTPA, has been synthesized. The fluorescein-DTPA-Fe2+ Complex mediates cleavages similar to those mediated by ATP-Fe2+. The data suggest the existence of N to P domain interactions in E1Na, with bound ATP-Fe2+ or fluorescein-DPTA-Fe2+, A-N, and A-P interactions in E-2(K), and provide testable constraints for model building. Molecular models based on the Ca2+-ATPase structure are consistent with the predictions. Specifically, high-affinity ATP-Mg2+ binding in E-1 is explained with the N domain tilted ca. 80degrees toward the P domain, by comparison with well-separated N and P domains in the Ca-ATPase crystal structure. With ATP-Mg2+ docked, bound Mg2+ is close to both D710 (in 710DGVNDS) and D443 (in 440VAGDASE). D710 is known to be crucial for Mg2+ binding. The cleavage and modeling data imply that D443 could also be a candidate for Mg2+ binding. Comparison of E-1.ATP,Mg2+ and E-2 models suggests an explanation of the high or low ATP affinities, respectively. We propose a scheme of ATP-Mg2+ and Mg2+ binding and N, P, and A domain interactions in the different conformations of the catalytic cycle.
引用
收藏
页码:11740 / 11749
页数:10
相关论文
共 59 条
[51]   Tight binding of bulky fluorescent derivatives of adenosine to the low affinity E2ATP site leads to inhibition of Na+/K+-ATPase -: Analysis of structural requirements of fluorescent ATP derivatives with a Koshland-Nemethy-Filmer model of two interacting ATP sites [J].
Thoenges, D ;
Amler, E ;
Eckert, T ;
Schoner, W .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1999, 274 (04) :1971-1978
[52]   Crystal structure of the calcium pump of sarcoplasmic reticulum at 2.6 Å resolution [J].
Toyoshima, C ;
Nakasako, M ;
Nomura, H ;
Ogawa, H .
NATURE, 2000, 405 (6787) :647-655
[53]  
TRAN CM, 1994, J BIOL CHEM, V269, P6558
[54]   IDENTIFICATION OF AN AMINO-ACID IN THE ATP BINDING-SITE OF NA+/K+-ATPASE AFTER PHOTOCHEMICAL LABELING WITH 8-AZIDO-ATP [J].
TRAN, CM ;
SCHEINERBOBIS, G ;
SCHONER, W ;
FARLEY, RA .
BIOCHEMISTRY, 1994, 33 (14) :4140-4147
[55]   Crystal structure of phosphoserine phosphatase from Methanococcus jannaschii, a hyperthermophile, at 1.8 Å resolution [J].
Wang, WR ;
Kim, R ;
Jancarik, J ;
Yokota, H ;
Kim, SH .
STRUCTURE, 2001, 9 (01) :65-71
[56]   Affinity labeling of two nucleotide sites on Na,K-ATPase using 2′(3′)-O-(2,4,6-trinitrophenyl)8-azidoadenosine 5′-[α-32P]diphosphate (TNP-8N3-[α-32P]ADP) as a photoactivatable probe -: Label incorporation before and after blocking the high affinity ATP site with fluorescein isothiocyanate [J].
Ward, DG ;
Cavieres, JD .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1998, 273 (50) :33759-33765
[57]   Binding of 2'(3')-O-(2,4,6-trinitrophenyl)ADP to soluble alpha beta protomers of Na,K-ATPase modified with fluorescein isothiocyanate - Evidence for two distinct nucleotide sites [J].
Ward, DG ;
Cavieres, JD .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1996, 271 (21) :12317-12321
[58]   SOLUBILIZED ALPHA-BETA NA,K-ATPASE REMAINS PROTOMERIC DURING TURNOVER YET SHOWS APPARENT NEGATIVE COOPERATIVITY TOWARD ATP [J].
WARD, DG ;
CAVIERES, JD .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1993, 90 (11) :5332-5336
[59]  
XU C, 2002, J MOL BIOL, V61, P884