Aggregating the amyloid Aβ11-25 peptide into a four-stranded β-sheet structure

被引:20
作者
Boucher, Genevive
Mousseau, Normand
Derreumaux, Philippe
机构
[1] Univ Montreal, Dept Phys, Montreal, PQ H3C 3J7, Canada
[2] Univ Montreal, Ctr Robert Cedergren Bioinformat, Montreal, PQ H3C 3J7, Canada
[3] Inst Biol Phys Chim, UPR 9080 CNRS, Lab Biochim Theor, F-75005 Paris, France
[4] Univ Paris 07, F-75005 Paris, France
关键词
protein aggregation; Alzheimer; beta amyloid; fibrils; molecular dynamics; activation-relaxation technique; simulation;
D O I
10.1002/prot.21134
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We present a detailed analysis of the structural properties of one monomer of A beta(11-25) as well as of the aggregation mechanisms for four chains of A beta(11-25) using the activation-relaxation technique coupled with a generic energy potential. Starting from a random distribution of these four chains, we find that the system assembles rapidly into a random globular state that evolves into three- and four-stranded antiparallel beta-sheets. The aggregation process is considerably accelerated by the presence of preformed dimers. We also find that the reptation mechanism already identified in shorter peptides plays a significant role here in allowing the structure to reorganize without having to fully dissociate.
引用
收藏
页码:877 / 888
页数:12
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