SEL1L, the human homolog of C-elegans sel-1:: refined physical mapping, gene structure and identification of polymorphic markers

被引:20
作者
Biunno, I
Bernard, L
Dear, P
Cattaneo, M
Volorio, S
Zannini, L
Bankier, A
Zollo, M
机构
[1] TIGEM, Telethon Inst Genet & Med, Milan, Italy
[2] CNR, Ist Tecnol Biomed Avanzate, I-20090 Milan, Italy
[3] MRC, Mol Biol Lab, Cambridge CB2 2QH, England
关键词
D O I
10.1007/s004390051032
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
We have cloned the human full-length cDNA SEL1L, which is highly similar to the C. elegans sel-1 gene, an important negative regulator of the "notch" pathway which acts as a key regulator of the cellular proliferation and specification processes in both vertebrates and invertebrates. The SEL1L gene maps to 14q24.3-31 and here we report its fine localization by HAPPY mapping, which determines its molecular distance to microsatellite markers isolated in the region. We have found two new polymorphic (CA)n microsatellites located in the gene, and have identified the exon-intron boundaries. The gene is composed of 21 exons spanning 70 kb of genomic DNA. Human SEL1L protein exhibits a high degree of similarity compared to the mouse and nematode homologs.
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页码:227 / 235
页数:9
相关论文
共 55 条
[1]  
Adam J, 1998, DEVELOPMENT, V125, P4645
[2]   ISSUES IN SEARCHING MOLECULAR SEQUENCE DATABASES [J].
ALTSCHUL, SF ;
BOGUSKI, MS ;
GISH, W ;
WOOTTON, JC .
NATURE GENETICS, 1994, 6 (02) :119-129
[3]   Gapped BLAST and PSI-BLAST: a new generation of protein database search programs [J].
Altschul, SF ;
Madden, TL ;
Schaffer, AA ;
Zhang, JH ;
Zhang, Z ;
Miller, W ;
Lipman, DJ .
NUCLEIC ACIDS RESEARCH, 1997, 25 (17) :3389-3402
[4]   NOTCH SIGNALING [J].
ARTAVANISTSAKONAS, S ;
MATSUNO, K ;
FORTINI, ME .
SCIENCE, 1995, 268 (5208) :225-232
[5]   HUMAN CYCLIN-F [J].
BAI, C ;
RICHMAN, R ;
ELLEDGE, SJ .
EMBO JOURNAL, 1994, 13 (24) :6087-6098
[6]   Isolation of a pancreas-specific gene located on human chromosome 14q31: Expression analysis in human pancreatic ductal carcinomas [J].
Biunno, I ;
Appierto, V ;
Cattaneo, M ;
Leone, BE ;
Balzano, G ;
Socci, C ;
Saccone, S ;
Letizia, A ;
DellaValle, G ;
Sgaramella, V .
GENOMICS, 1997, 46 (02) :284-286
[7]  
COLLIER IE, 1988, J BIOL CHEM, V263, P10711
[8]   A second-generation screen of the human genome for susceptibility to insulin-dependent diabetes mellitus [J].
Concannon, P ;
Gogolin-Ewens, KJ ;
Hinds, DA ;
Wapelhorst, B ;
Morrison, VA ;
Stirling, B ;
Mitra, M ;
Farmer, J ;
Williams, SR ;
Cox, NJ ;
Bell, GI ;
Risch, N ;
Spielman, RS .
NATURE GENETICS, 1998, 19 (03) :292-296
[9]  
Crowe R, 1998, DEVELOPMENT, V125, P767
[10]   A high-resolution metric HAPPY map of human chromosome 14 [J].
Dear, PH ;
Bankier, AT ;
Piper, MB .
GENOMICS, 1998, 48 (02) :232-241