Genetic instability and the quasispecies model

被引:29
作者
Brumer, Yisroel [1 ]
Michor, Franziska
Shakhnovich, Eugene I.
机构
[1] Harvard Univ, Dept Chem & Chem Biol, Cambridge, MA 02138 USA
[2] Harvard Univ, Harvard Soc Fellows, Program Evolutionary Biol, Cambridge, MA 02138 USA
基金
美国国家卫生研究院;
关键词
genetic instability; quasispecies model; mathematical biology;
D O I
10.1016/j.jtbi.2005.11.018
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Genetic instability is a defining characteristic of cancers. Microsatellite instability (MIN) leads to by elevated point mutation rates, whereas chromosomal instability (CIN) refers to increased rates of losing or gaining whole chromosomes or parts of chromosomes during cell division. CIN and MIN are, in general, mutually exclusive. The quasispecies model is a very successful theoretical framework for the study of evolution at high mutation rates. It predicts the existence of an experimentally verified error catastrophe. This catastrophe occurs when the mutation rates exceed a threshold value, the error threshold, above which replicative infidelity is incompatible with cell survival. We analyse the semiconservative quasispecies model of both MIN and CIN tumors. We consider the role of post-methylation DNA repair in tumor cells and demonstrate that DNA repair is fundamental to the nature of the error catastrophe in both types of tumors. We find that CIN introduces a plateau in the maximum viable mutation rate for a repair-free model, which does not exist in the case of MIN. This provides a plausible explanation for the mutual exclusivity of CIN and MIN. (c) 2005 Published by Elsevier Ltd.
引用
收藏
页码:216 / 222
页数:7
相关论文
共 29 条
[1]   THE AGE DISTRIBUTION OF CANCER AND A MULTI-STAGE THEORY OF CARCINOGENESIS [J].
ARMITAGE, P ;
DOLL, R .
BRITISH JOURNAL OF CANCER, 1954, 8 (01) :1-12
[2]   Carcinogen-specific induction of genetic instability [J].
Bardelli, A ;
Cahill, CP ;
Lederer, G ;
Speicher, MR ;
Kinzler, KW ;
Vogelstein, B ;
Lengauer, C .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (10) :5770-5775
[3]  
BARNETT L, 2003, THESIS U SUSSEX
[4]   Viral quasi-species and recombination [J].
Boerlijst, MC ;
Bonhoeffer, S ;
Nowak, MA .
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 1996, 263 (1376) :1577-1584
[5]   Resolving the evolutionary paradox of genetic instability: a cost-benefit analysis of DNA repair in changing environments [J].
Breivik, J ;
Gaudernack, G .
FEBS LETTERS, 2004, 563 (1-3) :7-12
[6]   Importance of DNA repair in tumor suppression [J].
Brumer, Y ;
Shakhnovich, EI .
PHYSICAL REVIEW E, 2004, 70 (06) :7
[7]  
BRUMER Y, 2004, QBIOBM0406011
[8]   RNA virus error catastrophe: Direct molecular test by using ribavirin [J].
Crotty, S ;
Cameron, CE ;
Andino, R .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (12) :6895-6900
[9]   SELFORGANIZATION OF MATTER AND EVOLUTION OF BIOLOGICAL MACROMOLECULES [J].
EIGEN, M .
NATURWISSENSCHAFTEN, 1971, 58 (10) :465-+
[10]  
EIGEN M, 1989, ADV CHEM PHYS, V75, P149