The genetic basis of DOORS syndrome: an exome-sequencing study

被引:165
作者
Campeau, Philippe M. [1 ]
Kasperaviciute, Dalia [2 ]
Lu, James T. [3 ,4 ]
Burrage, Lindsay C. [1 ]
Kim, Choel [5 ]
Hori, Mutsuki [6 ]
Powell, Berkley R. [7 ]
Stewart, Fiona [8 ]
Felix, Temis Maria [9 ]
van den Ende, Jenneke [10 ]
Wisniewska, Marzena [11 ]
Kayserili, Huelya [12 ]
Rump, Patrick [13 ]
Nampoothiri, Sheela [14 ]
Aftimos, Salim [15 ]
Mey, Antje [16 ]
Nair, Lal D. V. [17 ]
Begleiter, Michael L. [18 ,19 ]
De Bie, Isabelle [20 ]
Meenakshi, Girish [21 ,22 ]
Murray, Mitzi L. [23 ]
Repetto, Gabriela M. [24 ]
Golabi, Mahin [25 ]
Blair, Edward [26 ]
Male, Alison [27 ]
Giuliano, Fabienne [28 ]
Kariminejad, Ariana [29 ]
Newman, William G. [30 ,31 ,32 ]
Bhaskar, Sanjeev S. [30 ,31 ,32 ]
Dickerson, Jonathan E. [30 ,31 ,32 ]
Kerr, Bronwyn [30 ,31 ,32 ]
Banka, Siddharth [30 ,31 ,32 ]
Giltay, Jacques C. [33 ]
Wieczorek, Dagmar [34 ]
Tostevin, Anna [2 ]
Wiszniewska, Joanna [1 ]
Cheung, Sau Wai [1 ]
Hennekam, Raoul C. [35 ]
Gibbs, Richard A. [3 ]
Lee, Brendan H. [1 ,36 ]
Sisodiya, Sanjay M. [2 ,37 ]
机构
[1] Baylor Coll Med, Dept Mol & Human Genet, Houston, TX 77030 USA
[2] UCL, Inst Neurol, Dept Clin & Expt Epilepsy, London, England
[3] Baylor Coll Med, Human Genome Sequencing Ctr, Houston, TX 77030 USA
[4] Baylor Coll Med, Dept Struct & Computat Biol & Mol Biophys, Houston, TX 77030 USA
[5] Baylor Coll Med, Dept Pharmacol, Houston, TX 77030 USA
[6] Toyohashi Municipal Hosp, Dept Pediat, Toyohashi, Aichi, Japan
[7] Childrens Hosp Cent Calif, Madera, CA USA
[8] Belfast City Hosp, Genet Serv, Belfast BT9 7AD, Antrim, North Ireland
[9] Clin Hosp Porto Alegre, Med Genet Serv, Porto Alegre, RS, Brazil
[10] Univ Antwerp Hosp, Dept Med Genet, B-2650 Antwerp, Belgium
[11] Poznan Univ Med Sci, Dept Med Genet, Poznan, Poland
[12] Istanbul Univ, Istanbul Fac Med, Dept Med Genet, Istanbul, Turkey
[13] Univ Groningen, Univ Med Ctr Groningen, Dept Genet, Groningen, Netherlands
[14] Amrita Inst Med Sci & Res Ctr, Dept Pediat Genet, Ernakulam, Kerala, India
[15] Auckland City Hosp, Genet Hlth Serv New Zealand Northern Hub, Auckland, New Zealand
[16] Braunschweig Hosp, Braunschweig, Germany
[17] Saveetha Univ, Saveetha Med Coll & Hosp, Dept Pediat, Madras 600077, Tamil Nadu, India
[18] Childrens Mercy Hosp & Clin, Div Genet, Kansas City, KS USA
[19] Univ Missouri, Sch Med, Kansas City, KS USA
[20] McGill Univ, Ctr Hlth, Montreal Childrens Hosp, Dept Med Genet, Montreal, PQ H3A 2T5, Canada
[21] NKP Salve Inst Med Sci, Dept Pediat, Nagpur, Maharashtra, India
[22] Lata Mangeshkar Hosp, Nagpur, Maharashtra, India
[23] Univ Washington, Med Ctr, Seattle, WA 98195 USA
[24] Univ Desarrollo, Clin Alemana, Fac Med, Ctr Human Genet, Santiago, Chile
[25] Univ Calif San Francisco, Dept Pediat, San Francisco, CA USA
[26] Churchill Hosp, Dept Clin Genet, Oxford OX3 7LJ, England
[27] Great Ormond St Hosp Children NHS Fdn Trust, Dept Clin Genet, London, England
[28] CHU Nice, Ctr Reference Anomalie Dev & Syndromes Malformati, F-06202 Nice, France
[29] Kariminejad Najmabadi Pathol & Genet Ctr, Tehran, Iran
[30] Univ Manchester, Fac Med & Human Sci, Manchester Ctr Genom Med, Inst Human Dev, Manchester, Lancs, England
[31] Univ Manchester, Fac Med & Human Sci, Inst Human Dev, Manchester Ctr Genom,Ctr Genet Med, Manchester, Lancs, England
[32] St Marys Hosp, Manchester Acad Hlth Sci Ctr, Manchester M13 0JH, Lancs, England
[33] Univ Med Ctr Utrecht, Dept Med Genet, Utrecht, Netherlands
[34] Univ Duisburg Essen, Univ Hosp Essen, Inst Humangenet, Essen, Germany
[35] Univ Amsterdam, Acad Med Ctr, Dept Pediat & Translat Genet, NL-1105 AZ Amsterdam, Netherlands
[36] Howard Hughes Med Inst, Houston, TX 77030 USA
[37] Epilepsy Soc, Gerrards Cross, Bucks, England
基金
美国国家卫生研究院; 英国惠康基金;
关键词
MENTAL-RETARDATION; FOCAL EPILEPSY; MUTATIONS; DEAFNESS; SEIZURES; SPECTRUM; DOMAIN;
D O I
10.1016/S1474-4422(13)70265-5
中图分类号
R74 [神经病学与精神病学];
学科分类号
100204 [神经病学];
摘要
Background Deafness, onychodystrophy, osteodystrophy, mental retardation, and seizures (DOORS) syndrome is a rare autosomal recessive disorder of unknown cause. We aimed to identify the genetic basis of this syndrome by sequencing most coding exons in affected individuals. Methods Through a search of available case studies and communication with collaborators, we identified families that included at least one individual with at least three of the five main features of the DOORS syndrome: deafness, onychodystrophy, osteodystrophy, intellectual disability, and seizures. Participants were recruited from 26 centres in 17 countries. Families described in this study were enrolled between Dec 1, 2010, and March 1, 2013. Collaborating physicians enrolling participants obtained clinical information and DNA samples from the affected child and both parents if possible. We did whole-exome sequencing in affected individuals as they were enrolled, until we identified a candidate gene, and Sanger sequencing to confirm mutations. We did expression studies in human fibroblasts from one individual by real-time PCR and western blot analysis, and in mouse tissues by immunohistochemistry and real-time PCR. Findings 26 families were included in the study. We did whole-exome sequencing in the first 17 enrolled families; we screened for TBC1D24 by Sanger sequencing in subsequent families. We identified TBC1D24 mutations in 11 individuals from nine families (by exome sequencing in seven families, and Sanger sequencing in two families). 18 families had individuals with all five main features of DOORS syndrome, and TBC1D24 mutations were identified in half of these families. The seizure types in individuals with TBC1D24 mutations induded generalised tonic-donic, complex partial, focal clonic, and infantile spasms. Of the 18 individuals with DOORS syndrome from 17 families without TBC1D24 mutations, eight did not have seizures and three did not have deafness. In expression studies, some mutations abrogated TBC1D24 mRNA stability. We also detected Tbc1d24 expression in mouse phalangeal chondrocytes and calvaria, which suggests a role of TBC1D24 in skeletogenesis. Interpretation Our findings suggest that mutations in TBC1D24 seem to be an important cause of DOORS syndrome and can cause diverse phenotypes. Thus, individuals with DOORS syndrome without deafness and seizures but with the other features should still be screened for TBC1D24 mutations. More information is needed to understand the cellular roles of TBC1D24 and identify the genes responsible for DOORS phenotypes in individuals who do not have a mutation in TBC1D24.
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收藏
页码:44 / 58
页数:15
相关论文
共 40 条
[1]
TBC1D24 mutation associated with focal epilepsy, cognitive impairment and a distinctive cerebro-cerebellar malformation [J].
Afawi, Zaid ;
Mandelstam, Simone ;
Korczyn, Amos D. ;
Kivity, Sara ;
Walid, Simri ;
Shalata, Adel ;
Oliver, Karen L. ;
Corbett, Mark ;
Gecz, Jozef ;
Berkovic, Samuel F. ;
Jackson, Graeme D. .
EPILEPSY RESEARCH, 2013, 105 (1-2) :240-244
[2]
Molecular bases and clinical spectrum of early infantile epileptic encephalopathies [J].
Asher, Y. Jane Tavyev ;
Scaglia, Fernando .
EUROPEAN JOURNAL OF MEDICAL GENETICS, 2012, 55 (05) :299-306
[3]
Crystal structure of the TLDc domain of oxidation resistance protein 2 from zebrafish [J].
Blaise, Mickael ;
Alsarraf, Husam M. A. B. ;
Wong, Jaslyn E. M. M. ;
Midtgaard, Soren Roi ;
Laroche, Fabrice ;
Schack, Lotte ;
Spaink, Herman ;
Stougaard, Jens ;
Thirup, Soren .
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2012, 80 (06) :1694-1698
[4]
Early childhood presentation of Czech dysplasia [J].
Burrage, Lindsay C. ;
Lu, James T. ;
Liu, David S. ;
Moss, Timothy J. ;
Gibbs, Richard ;
Schlesinger, Alan E. ;
Bacino, Carlos A. ;
Campeau, Philippe M. ;
Lee, Brendan H. .
CLINICAL DYSMORPHOLOGY, 2013, 22 (02) :76-80
[5]
Whole-exome sequencing identifies mutations in the nucleoside transporter gene SLC29A3 in dysosteosclerosis, a form of osteopetrosis [J].
Campeau, Philippe M. ;
Lu, James T. ;
Sule, Gautam ;
Jiang, Ming-Ming ;
Bae, Yangjin ;
Madan, Simran ;
Hoegler, Wolfgang ;
Shaw, Nicholas J. ;
Mumm, Steven ;
Gibbs, Richard A. ;
Whyte, Michael P. ;
Lee, Brendan H. .
HUMAN MOLECULAR GENETICS, 2012, 21 (22) :4904-4909
[6]
Mutations in KAT6B, Encoding a Histone Acetyltransferase, Cause Genitopatellar Syndrome [J].
Campeau, Philippe M. ;
Kim, Jaeseung C. ;
Lu, James T. ;
Schwartzentruber, Jeremy A. ;
Abdul-Rahman, Omar A. ;
Schlaubitz, Silke ;
Murdock, David M. ;
Jiang, Ming-Ming ;
Lammer, Edward J. ;
Enns, Gregory M. ;
Rhead, William J. ;
Rowland, Jon ;
Robertson, Stephen P. ;
Cormier-Daire, Valerie ;
Bainbridge, Matthew N. ;
Yang, Xiang-Jiao ;
Gingras, Marie-Claude ;
Gibbs, Richard A. ;
Rosenblatt, David S. ;
Majewski, Jacek ;
Lee, Brendan H. .
AMERICAN JOURNAL OF HUMAN GENETICS, 2012, 90 (02) :282-289
[7]
CANTWELL RJ, 1975, HUMANGENETIK, V26, P261
[8]
A Focal Epilepsy and Intellectual Disability Syndrome Is Due to a Mutation in TBC1D24 [J].
Corbett, Mark A. ;
Bahlo, Melanie ;
Jolly, Lachlan ;
Afawi, Zaid ;
Gardner, Alison E. ;
Oliver, Karen L. ;
Tan, Stanley ;
Coffey, Amy ;
Mulley, John C. ;
Dibbens, Leanne M. ;
Simri, Walid ;
Shalata, Adel ;
Kivity, Sara ;
Jackson, Graeme D. ;
Berkovic, Samuel F. ;
Gecz, Jozef .
AMERICAN JOURNAL OF HUMAN GENETICS, 2010, 87 (03) :371-375
[9]
Mutations in DEPDC5 cause familial focal epilepsy with variable foci [J].
Dibbens, Leanne M. ;
de Vries, Boukje ;
Donatello, Simona ;
Heron, Sarah E. ;
Hodgson, Bree L. ;
Chintawar, Satyan ;
Crompton, Douglas E. ;
Hughes, James N. ;
Bellows, Susannah T. ;
Klein, Karl Martin ;
Callenbach, Petra M. C. ;
Corbett, Mark A. ;
Gardner, Alison E. ;
Kivity, Sara ;
Iona, Xenia ;
Regan, Brigid M. ;
Weller, Claudia M. ;
Crimmins, Denis ;
O'Brien, Terence J. ;
Guerrero-Lopez, Rosa ;
Mulley, John C. ;
Dubeau, Francois ;
Licchetta, Laura ;
Bisulli, Francesca ;
Cossette, Patrick ;
Thomas, Paul Q. ;
Gecz, Jozef ;
Serratosa, Jose ;
Brouwer, Oebele F. ;
Andermann, Frederick ;
Andermann, Eva ;
van den Maagdenberg, Arn M. J. M. ;
Pandolfo, Massimo ;
Berkovic, Samuel F. ;
Scheffer, Ingrid E. .
NATURE GENETICS, 2013, 45 (05) :546-U123
[10]
Stress induction and mitochondrial localization of Oxr1 proteins in yeast and humans [J].
Elliott, NA ;
Volkert, MR .
MOLECULAR AND CELLULAR BIOLOGY, 2004, 24 (08) :3180-3187