Experimental models for dynamic compartmentalization of biomolecules in liquid organelles: Reversible formation and partitioning in aqueous biphasic systems

被引:97
作者
Aumiller, William M., Jr. [1 ]
Keating, Christine D. [1 ]
机构
[1] Penn State Univ, Dept Chem, University Pk, PA 16802 USA
基金
美国国家科学基金会;
关键词
Aqueous two-phase system; Coacervate; Intrinsically disordered protein; Droplet; Phosphorylation; CRITICAL SOLUTION TEMPERATURE; IN-WATER EMULSIONS; PHASE-SEPARATION; COMPLEX COACERVATION; 2-PHASE SYSTEMS; POLYETHYLENEGLYCOL-DEXTRAN; HORSERADISH-PEROXIDASE; SPATIAL-ORGANIZATION; INTERFACIAL-TENSION; NUCLEAR-BODIES;
D O I
10.1016/j.cis.2016.06.011
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070305 [高分子化学与物理];
摘要
Living cells contain numerous subcellular compartments, many of which lack membranous boundaries and are thought to occur due to liquid-liquid phase coexistence. This review will introduce these biological membraneless organelles and discuss simple experimental models based on liquid-liquid phase separation in polymer solutions. When more than one phase is present, solutes such as proteins or nucleic acids can be compartmentalized by partitioning into one of the phases. This could confer benefits to the cell such as enhanced reaction rates or sequestration of toxic molecules. Liquid-like compartments inside living cells are often dynamic, for example, appearing and disappearing in response to stimuli and/or at different points in the cell cycle. We will discuss mechanisms by which phase transitions can be induced in the laboratory and inside living cells, with special emphasis on regulating phase formation by phosphorylation state. This work is motivated by a desire to understand the physical and chemical mechanisms that underlie biological processes and to enable new non biological applications. (C) 2016 Elsevier B.V. All rights reserved.
引用
收藏
页码:75 / 87
页数:13
相关论文
共 114 条
[1]
NOPdb: Nucleolar Proteome Database-2008 update [J].
Ahmad, Yasmeen ;
Boisvert, Francois-Michel ;
Gregor, Peter ;
Cobley, Andy ;
Lamond, Angus I. .
NUCLEIC ACIDS RESEARCH, 2009, 37 :D181-D184
[2]
Albertsson P.A., 1986, PARTITION CELL PARTI
[3]
AFFINITY SEPARATION OF PROTEINS IN AQUEOUS 3-PHASE SYSTEMS [J].
ALBERTSSON, PA ;
BIRKENMEIER, G .
ANALYTICAL BIOCHEMISTRY, 1988, 175 (01) :154-161
[4]
Liquid demixing of intrinsically disordered proteins is seeded by poly(ADP-ribose) [J].
Altmeyer, Matthias ;
Neelsen, Kai J. ;
Teloni, Federico ;
Pozdnyakova, Irina ;
Pellegrino, Stefania ;
Grofte, Merete ;
Rask, Maj-Britt Druedahl ;
Streicher, Werner ;
Jungmichel, Stephanie ;
Nielsen, Michael Lund ;
Lukas, Jiri .
NATURE COMMUNICATIONS, 2015, 6
[5]
Complete Budding and Asymmetric Division of Primitive Model Cells To Produce Daughter Vesicles with Different Interior and Membrane Compositions [J].
Andes-Koback, Meghan ;
Keating, Christine D. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2011, 133 (24) :9545-9555
[6]
Aqueous two-phase systems for protein separation: A perspective [J].
Asenjo, Juan A. ;
Andrews, Barbara A. .
JOURNAL OF CHROMATOGRAPHY A, 2011, 1218 (49) :8826-8835
[7]
Aumiller WM, 2016, NAT CHEM, V8, P129, DOI [10.1038/NCHEM.2414, 10.1038/nchem.2414]
[8]
Interactions of Macromolecular Crowding Agents and Cosolutes with, Small-Molecule Substrates: Effect on Horseradish Peroxidase Activity with Two Different Substrates [J].
Aumiller, William M., Jr. ;
Davis, Bradley W. ;
Hatzakis, Emmanuel ;
Keating, Christine D. .
JOURNAL OF PHYSICAL CHEMISTRY B, 2014, 118 (36) :10624-10632
[9]
Coupled Enzyme Reactions Performed in Heterogeneous Reaction Media: Experiments and Modeling for Glucose Oxidase and Horseradish Peroxidase in a PEG/Citrate Aqueous Two-Phase System [J].
Aumiller, William M., Jr. ;
Davis, Bradley W. ;
Hashemian, Negar ;
Maranas, Costas ;
Armaou, Antonios ;
Keating, Christine D. .
JOURNAL OF PHYSICAL CHEMISTRY B, 2014, 118 (09) :2506-2517
[10]
Phase Separation as a Possible Means of Nuclear Compartmentalization [J].
Aumiller, William M., Jr. ;
Davis, Bradley W. ;
Keating, Christine D. .
NEW MODELS OF THE CELL NUCLEUS: CROWDING, ENTROPIC FORCES, PHASE SEPARATION, AND FRACTALS, 2014, 307 :109-149