A review of lipidomic technologies applicable to sphingolipidomics and their relevant applications

被引:49
作者
Han, Xlanlin [1 ]
Jiang, Xuntian [1 ]
机构
[1] Washington Univ, Sch Med, Dept Internal Med, Div Bioorgan Chem & Mol Pharmacol, St Louis, MO 63110 USA
关键词
Intrasource separation; Lipidomics; Multi-dimensional mass spectrometry; Sphingolipidomics; Shotgun lipidomics; TANDEM MASS-SPECTROMETRY; SIMULTANEOUS QUANTITATIVE-ANALYSIS; DATA-DEPENDENT ACQUISITION; BIOLOGICAL SAMPLES; SHOTGUN LIPIDOMICS; CELLULAR LIPIDOMES; ESI-MS/MS; MULTIPLE PRECURSOR; TARGETED LIPIDOMICS; DRUG DEVELOPMENT;
D O I
10.1002/ejlt.200800117
中图分类号
TS2 [食品工业];
学科分类号
0832 ;
摘要
Sphingolipiclomics, a branch of lipidomics, focuses on the large-scale study of the cellular sphingolipidomes. In the current review, two main approaches for the analysis of cellular sphingolipidomes (i.e. LC-MS- or LC-MS/MS-based approach and shotgun lipidomics-based approach) are briefly discussed. Their advantages, some considerations of these methods, and recent applications Of these approaches are summarized. It is the authors' sincere hope that this review article will add to the readers understanding of the advantages and limitations of each developed method for die analysis of a cellular sphingolipidome.
引用
收藏
页码:39 / 52
页数:14
相关论文
共 73 条
[1]   Current Applications of Liquid Chromatography/Mass Spectrometry in Pharmaceutical Discovery After a Decade of Innovation [J].
Ackermann, Bradley L. ;
Berna, Michael J. ;
Eckstein, James A. ;
Ott, Lee W. ;
Chaudhary, Ajai K. .
ANNUAL REVIEW OF ANALYTICAL CHEMISTRY, 2008, 1 (357-396) :357-396
[2]   Myocardial lipidomics. Developments in myocardial nuclear lipidomics [J].
Albert, Carolyn J. ;
Anbukumar, Dhanalakshmi S. ;
Monda, Julie K. ;
Eckelkamp, Joseph T. ;
Ford, David A. .
FRONTIERS IN BIOSCIENCE, 2007, 12 :2750-2760
[3]   An "omics" view of drug development [J].
Altman, RB ;
Rubin, DL ;
Klein, TE .
DRUG DEVELOPMENT RESEARCH, 2004, 62 (02) :81-85
[4]   Quantitative analysis of sphingoid base-1-phosphates as bisacetylated derivatives by liquid chromatography-tandem mass spectrometry [J].
Berdyshev, EV ;
Gorshkova, IA ;
Garcia, JGN ;
Natarajan, V ;
Hubbard, WC .
ANALYTICAL BIOCHEMISTRY, 2005, 339 (01) :129-136
[5]   Simultaneous quantitative analysis of bioactive sphingolipids by high-performance liquid chromatography-tandem mass spectrometry [J].
Bielawski, Jacek ;
Szulc, Zdzislaw M. ;
Hannun, Yusuf A. ;
Bielawska, Alicja .
METHODS, 2006, 39 (02) :82-91
[6]   Quantitative analysis of biological membrane lipids at the low picomole level by nano-electrospray ionization tandem mass spectrometry [J].
Brugger, B ;
Erben, G ;
Sandhoff, R ;
Wieland, FT ;
Lehmann, WD .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1997, 94 (06) :2339-2344
[7]   A high-performance liquid chromatographic method to measure sphingosine 1-phosphate and related compounds from sphingosine kinase assays and other biological samples [J].
Caligan, TB ;
Peters, K ;
Ou, J ;
Wang, E ;
Saba, J ;
Merrill, AH .
ANALYTICAL BIOCHEMISTRY, 2000, 281 (01) :36-44
[8]  
Cheng H, 2003, CELL MOL BIOL, V49, P809
[9]   Alterations in lipid homeostasis of mouse dorsal root ganglia induced by apolipoprotein E deficiency: a shotgun lipidomics study [J].
Cheng, Hua ;
Jiang, Xuntian ;
Han, Xianlin .
JOURNAL OF NEUROCHEMISTRY, 2007, 101 (01) :57-76
[10]   An introduction to quadrupole-time-of-flight mass spectrometry [J].
Chernushevich, IV ;
Loboda, AV ;
Thomson, BA .
JOURNAL OF MASS SPECTROMETRY, 2001, 36 (08) :849-865